Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.98□□□□□ -0.33
ZNF253O75346 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.98□□□□□ -0.33
ZNF253O75346 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
ZNF253O75346 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ZNF253O75346 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
ZNF253O75346 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ZNF253O75346 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 AL021920.2-201ENST00000624828 1351 ntBASIC12.98□□□□□ -0.33
ZNF253O75346 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ZNF253O75346 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.98□□□□□ -0.33
ZNF253O75346 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.98□□□□□ -0.33
ZNF253O75346 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC12.98□□□□□ -0.33
ZNF253O75346 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ZNF253O75346 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.98□□□□□ -0.33
ZNF253O75346 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.98□□□□□ -0.33
ZNF253O75346 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.98□□□□□ -0.33
ZNF253O75346 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.98□□□□□ -0.33
ZNF253O75346 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.98□□□□□ -0.33
ZNF253O75346 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.98□□□□□ -0.33
ZNF253O75346 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.98□□□□□ -0.33
ZNF253O75346 LINC01023-201ENST00000606054 436 ntBASIC12.98□□□□□ -0.33
ZNF253O75346 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ZNF253O75346 AC066615.1-201ENST00000640911 628 ntBASIC12.98□□□□□ -0.33
ZNF253O75346 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.98□□□□□ -0.33
ZNF253O75346 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.98□□□□□ -0.33
ZNF253O75346 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.98□□□□□ -0.33
ZNF253O75346 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ZNF253O75346 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ZNF253O75346 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 PCDHA3-202ENST00000532566 4594 ntBASIC12.98□□□□□ -0.33
ZNF253O75346 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.98□□□□□ -0.33
ZNF253O75346 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ZNF253O75346 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF253O75346 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF253O75346 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
ZNF253O75346 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF253O75346 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF253O75346 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF253O75346 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ZNF253O75346 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF253O75346 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF253O75346 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
ZNF253O75346 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.97□□□□□ -0.33
ZNF253O75346 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF253O75346 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ZNF253O75346 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF253O75346 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
ZNF253O75346 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ZNF253O75346 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF253O75346 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.97□□□□□ -0.33
ZNF253O75346 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ZNF253O75346 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF253O75346 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF253O75346 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF253O75346 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF253O75346 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF253O75346 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF253O75346 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF253O75346 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF253O75346 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.97□□□□□ -0.33
ZNF253O75346 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF253O75346 SIGLEC30P-201ENST00000455569 941 ntBASIC12.97□□□□□ -0.33
ZNF253O75346 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF253O75346 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF253O75346 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
ZNF253O75346 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.97□□□□□ -0.33
ZNF253O75346 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.97□□□□□ -0.33
ZNF253O75346 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF253O75346 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms