Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SLC28A2O43868 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC28A2O43868 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC28A2O43868 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC28A2O43868 MEIS3P1-201ENST00000495167 958 ntBASIC16.02■□□□□ 0.16
SLC28A2O43868 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC28A2O43868 IGHV3-65-201ENST00000523210 341 ntBASIC16.02■□□□□ 0.16
SLC28A2O43868 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC28A2O43868 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.02■□□□□ 0.16
SLC28A2O43868 RN7SL204P-201ENST00000582831 262 ntBASIC16.02■□□□□ 0.16
SLC28A2O43868 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.02■□□□□ 0.16
SLC28A2O43868 AC004706.3-202ENST00000621574 984 ntBASIC16.02■□□□□ 0.16
SLC28A2O43868 AC010507.1-201ENST00000633895 436 ntBASIC16.02■□□□□ 0.16
SLC28A2O43868 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC28A2O43868 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SLC28A2O43868 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SLC28A2O43868 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SLC28A2O43868 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC28A2O43868 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SLC28A2O43868 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC28A2O43868 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC28A2O43868 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC28A2O43868 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC28A2O43868 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.02■□□□□ 0.15
SLC28A2O43868 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.02■□□□□ 0.15
SLC28A2O43868 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC28A2O43868 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC28A2O43868 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
SLC28A2O43868 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC28A2O43868 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC28A2O43868 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC28A2O43868 FRMD8P1-201ENST00000440433 1524 ntBASIC16.01■□□□□ 0.15
SLC28A2O43868 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC28A2O43868 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 TFAMP1-201ENST00000412727 736 ntBASIC16.01■□□□□ 0.15
SLC28A2O43868 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC28A2O43868 RPS15P9-201ENST00000494093 319 ntBASIC16.01■□□□□ 0.15
SLC28A2O43868 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC28A2O43868 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
SLC28A2O43868 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC28A2O43868 AC008667.4-201ENST00000607370 168 ntBASIC16.01■□□□□ 0.15
SLC28A2O43868 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
SLC28A2O43868 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.01■□□□□ 0.15
SLC28A2O43868 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SLC28A2O43868 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC28A2O43868 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SLC28A2O43868 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC28A2O43868 AC079328.2-201ENST00000561241 3354 ntBASIC16.01■□□□□ 0.15
SLC28A2O43868 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A2O43868 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SLC28A2O43868 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
SLC28A2O43868 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SLC28A2O43868 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SLC28A2O43868 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SLC28A2O43868 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16■□□□□ 0.15
SLC28A2O43868 AC078925.2-201ENST00000624013 1973 ntBASIC16■□□□□ 0.15
SLC28A2O43868 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16■□□□□ 0.15
SLC28A2O43868 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16■□□□□ 0.15
SLC28A2O43868 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC28A2O43868 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC28A2O43868 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
SLC28A2O43868 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16■□□□□ 0.15
SLC28A2O43868 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16■□□□□ 0.15
SLC28A2O43868 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16■□□□□ 0.15
SLC28A2O43868 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16■□□□□ 0.15
SLC28A2O43868 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC28A2O43868 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
SLC28A2O43868 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SLC28A2O43868 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC28A2O43868 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC28A2O43868 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16■□□□□ 0.15
SLC28A2O43868 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC28A2O43868 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SLC28A2O43868 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SLC28A2O43868 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16■□□□□ 0.15
SLC28A2O43868 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC28A2O43868 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC28A2O43868 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms