Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
NDUFA1O15239 KLF4P1-201ENST00000412782 1185 ntBASIC11.4□□□□□ -0.58
NDUFA1O15239 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
NDUFA1O15239 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC11.4□□□□□ -0.58
NDUFA1O15239 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.4□□□□□ -0.58
NDUFA1O15239 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.4□□□□□ -0.58
NDUFA1O15239 SPDYE13P-201ENST00000445314 798 ntBASIC11.4□□□□□ -0.58
NDUFA1O15239 AC104076.2-201ENST00000448912 469 ntBASIC11.4□□□□□ -0.58
NDUFA1O15239 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 BX276092.5-203ENST00000456199 560 ntBASIC11.4□□□□□ -0.58
NDUFA1O15239 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC11.4□□□□□ -0.58
NDUFA1O15239 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC11.4□□□□□ -0.58
NDUFA1O15239 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.4□□□□□ -0.58
NDUFA1O15239 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC11.4□□□□□ -0.58
NDUFA1O15239 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC11.4□□□□□ -0.58
NDUFA1O15239 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.4□□□□□ -0.58
NDUFA1O15239 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
NDUFA1O15239 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC11.4□□□□□ -0.58
NDUFA1O15239 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
NDUFA1O15239 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
NDUFA1O15239 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC11.4□□□□□ -0.58
NDUFA1O15239 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC11.4□□□□□ -0.58
NDUFA1O15239 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFA1O15239 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
NDUFA1O15239 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC11.4□□□□□ -0.59
NDUFA1O15239 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
NDUFA1O15239 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
NDUFA1O15239 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
NDUFA1O15239 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
NDUFA1O15239 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
NDUFA1O15239 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
NDUFA1O15239 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
NDUFA1O15239 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC11.39□□□□□ -0.59
NDUFA1O15239 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC11.39□□□□□ -0.59
NDUFA1O15239 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
NDUFA1O15239 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC11.39□□□□□ -0.59
NDUFA1O15239 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC11.39□□□□□ -0.59
NDUFA1O15239 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 AP005117.1-202ENST00000581724 1908 ntBASIC11.39□□□□□ -0.59
NDUFA1O15239 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
NDUFA1O15239 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC11.39□□□□□ -0.59
NDUFA1O15239 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
NDUFA1O15239 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
NDUFA1O15239 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
NDUFA1O15239 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.39□□□□□ -0.59
NDUFA1O15239 KRT8P10-201ENST00000450021 1447 ntBASIC11.39□□□□□ -0.59
NDUFA1O15239 MEG3-211ENST00000452514 461 ntTSL 3 BASIC11.39□□□□□ -0.59
NDUFA1O15239 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 DUX4L26-201ENST00000489078 1255 ntBASIC11.39□□□□□ -0.59
NDUFA1O15239 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.39□□□□□ -0.59
NDUFA1O15239 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
NDUFA1O15239 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.39□□□□□ -0.59
NDUFA1O15239 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.39□□□□□ -0.59
NDUFA1O15239 RBM42-202ENST00000586618 771 ntTSL 3 BASIC11.39□□□□□ -0.59
NDUFA1O15239 AL121672.3-201ENST00000608644 468 ntBASIC11.39□□□□□ -0.59
NDUFA1O15239 AC009336.1-201ENST00000608941 1553 ntBASIC11.39□□□□□ -0.59
NDUFA1O15239 AL353801.3-201ENST00000609898 542 ntBASIC11.39□□□□□ -0.59
NDUFA1O15239 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC11.39□□□□□ -0.59
NDUFA1O15239 AL049757.1-201ENST00000616842 1596 ntBASIC11.39□□□□□ -0.59
NDUFA1O15239 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC11.39□□□□□ -0.59
NDUFA1O15239 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
NDUFA1O15239 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.39□□□□□ -0.59
NDUFA1O15239 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 SP100-205ENST00000409824 1802 ntTSL 5 BASIC11.39□□□□□ -0.59
NDUFA1O15239 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC11.39□□□□□ -0.59
NDUFA1O15239 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC11.39□□□□□ -0.59
NDUFA1O15239 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
NDUFA1O15239 AL021920.2-201ENST00000624828 1351 ntBASIC11.39□□□□□ -0.59
NDUFA1O15239 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC11.39□□□□□ -0.59
NDUFA1O15239 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFA1O15239 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.39□□□□□ -0.59
NDUFA1O15239 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms