Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN9O14815 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CAPN9O14815 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN9O14815 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN9O14815 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN9O14815 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CAPN9O14815 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN9O14815 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN9O14815 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CAPN9O14815 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN9O14815 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CAPN9O14815 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN9O14815 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN9O14815 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.54■□□□□ 0.4
CAPN9O14815 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPN9O14815 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CAPN9O14815 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPN9O14815 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CAPN9O14815 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPN9O14815 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CAPN9O14815 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 AL603756.1-201ENST00000606511 2163 ntBASIC17.53■□□□□ 0.4
CAPN9O14815 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CAPN9O14815 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPN9O14815 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPN9O14815 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPN9O14815 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPN9O14815 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.53■□□□□ 0.4
CAPN9O14815 BX842568.4-201ENST00000421222 227 ntBASIC17.53■□□□□ 0.4
CAPN9O14815 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPN9O14815 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 AC068137.2-201ENST00000605408 478 ntBASIC17.53■□□□□ 0.4
CAPN9O14815 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPN9O14815 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPN9O14815 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CAPN9O14815 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPN9O14815 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPN9O14815 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CAPN9O14815 AC078925.2-201ENST00000624013 1973 ntBASIC17.53■□□□□ 0.4
CAPN9O14815 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN9O14815 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPN9O14815 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN9O14815 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN9O14815 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN9O14815 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN9O14815 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.52■□□□□ 0.4
CAPN9O14815 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN9O14815 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CAPN9O14815 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN9O14815 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPN9O14815 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN9O14815 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN9O14815 HMGN1P19-201ENST00000436976 333 ntBASIC17.52■□□□□ 0.4
CAPN9O14815 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CAPN9O14815 MTDHP5-201ENST00000598980 586 ntBASIC17.52■□□□□ 0.4
CAPN9O14815 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.52■□□□□ 0.4
CAPN9O14815 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.52■□□□□ 0.4
CAPN9O14815 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN9O14815 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN9O14815 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN9O14815 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN9O14815 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.52■□□□□ 0.39
CAPN9O14815 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.52■□□□□ 0.39
CAPN9O14815 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CAPN9O14815 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN9O14815 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN9O14815 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.39
CAPN9O14815 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN9O14815 DOC2GP-204ENST00000639052 2548 ntBASIC17.52■□□□□ 0.39
CAPN9O14815 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN9O14815 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN9O14815 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.52■□□□□ 0.39
CAPN9O14815 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN9O14815 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.51■□□□□ 0.39
CAPN9O14815 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms