Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC26.19■■□□□ 1.78
CHD1O14646 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHD1O14646 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC26.19■■□□□ 1.78
CHD1O14646 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC26.19■■□□□ 1.78
CHD1O14646 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC26.19■■□□□ 1.78
CHD1O14646 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHD1O14646 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC26.19■■□□□ 1.78
CHD1O14646 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC26.19■■□□□ 1.78
CHD1O14646 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC26.19■■□□□ 1.78
CHD1O14646 CNN2P10-201ENST00000443067 918 ntBASIC26.19■■□□□ 1.78
CHD1O14646 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHD1O14646 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC26.19■■□□□ 1.78
CHD1O14646 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC26.19■■□□□ 1.78
CHD1O14646 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC26.19■■□□□ 1.78
CHD1O14646 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHD1O14646 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CHD1O14646 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CHD1O14646 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHD1O14646 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHD1O14646 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC26.18■■□□□ 1.78
CHD1O14646 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHD1O14646 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHD1O14646 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC26.18■■□□□ 1.78
CHD1O14646 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CHD1O14646 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC26.18■■□□□ 1.78
CHD1O14646 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHD1O14646 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CHD1O14646 KRTAP19-9P-201ENST00000421795 191 ntBASIC26.18■■□□□ 1.78
CHD1O14646 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHD1O14646 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC26.18■■□□□ 1.78
CHD1O14646 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC26.18■■□□□ 1.78
CHD1O14646 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC26.18■■□□□ 1.78
CHD1O14646 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC26.18■■□□□ 1.78
CHD1O14646 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHD1O14646 GGT4P-201ENST00000623672 1708 ntBASIC26.18■■□□□ 1.78
CHD1O14646 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHD1O14646 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHD1O14646 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC26.18■■□□□ 1.78
CHD1O14646 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHD1O14646 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHD1O14646 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CHD1O14646 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CHD1O14646 MIR1202-201ENST00000408529 83 ntBASIC26.17■■□□□ 1.78
CHD1O14646 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC26.17■■□□□ 1.78
CHD1O14646 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC26.17■■□□□ 1.78
CHD1O14646 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
CHD1O14646 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC26.17■■□□□ 1.78
CHD1O14646 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHD1O14646 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHD1O14646 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHD1O14646 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC26.17■■□□□ 1.78
CHD1O14646 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC26.17■■□□□ 1.78
CHD1O14646 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
CHD1O14646 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHD1O14646 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC26.17■■□□□ 1.78
CHD1O14646 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC26.17■■□□□ 1.78
CHD1O14646 BRF1-202ENST00000379932 884 ntTSL 5 BASIC26.17■■□□□ 1.78
CHD1O14646 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
CHD1O14646 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
CHD1O14646 HOMER2P2-201ENST00000451621 847 ntBASIC26.17■■□□□ 1.78
CHD1O14646 NAT9-222ENST00000583476 583 ntTSL 3 BASIC26.17■■□□□ 1.78
CHD1O14646 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CHD1O14646 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CHD1O14646 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CHD1O14646 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
CHD1O14646 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
CHD1O14646 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CHD1O14646 GPAA1P2-202ENST00000606848 1787 ntBASIC26.16■■□□□ 1.78
CHD1O14646 TPR-209ENST00000613151 2478 ntTSL 5 BASIC26.16■■□□□ 1.78
CHD1O14646 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
CHD1O14646 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
CHD1O14646 AC007274.2-201ENST00000421675 662 ntBASIC26.16■■□□□ 1.78
CHD1O14646 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC26.16■■□□□ 1.78
CHD1O14646 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
CHD1O14646 REXO1L8P-201ENST00000604378 1897 ntBASIC26.16■■□□□ 1.78
CHD1O14646 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC26.15■■□□□ 1.78
CHD1O14646 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHD1O14646 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
CHD1O14646 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC26.15■■□□□ 1.78
CHD1O14646 AC006001.1-201ENST00000325130 474 ntBASIC26.15■■□□□ 1.78
CHD1O14646 TEX30-203ENST00000376022 828 ntTSL 2 BASIC26.15■■□□□ 1.78
CHD1O14646 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC26.15■■□□□ 1.78
CHD1O14646 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
CHD1O14646 RN7SL720P-201ENST00000488178 304 ntBASIC26.15■■□□□ 1.78
CHD1O14646 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC26.15■■□□□ 1.78
CHD1O14646 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC26.15■■□□□ 1.78
CHD1O14646 AC107373.2-201ENST00000607735 490 ntBASIC26.15■■□□□ 1.78
CHD1O14646 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC26.15■■□□□ 1.78
CHD1O14646 AP000346.4-201ENST00000614827 381 ntBASIC26.15■■□□□ 1.78
CHD1O14646 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHD1O14646 AC090164.3-201ENST00000610780 2143 ntBASIC26.15■■□□□ 1.78
CHD1O14646 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC26.15■■□□□ 1.78
CHD1O14646 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHD1O14646 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
CHD1O14646 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CHD1O14646 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHD1O14646 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
CHD1O14646 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CHD1O14646 FAM197Y7-201ENST00000432892 766 ntBASIC26.14■■□□□ 1.78
CHD1O14646 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms