Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP4M1O00189 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
AP4M1O00189 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP4M1O00189 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP4M1O00189 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP4M1O00189 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP4M1O00189 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
AP4M1O00189 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.78□□□□□ -0.2
AP4M1O00189 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP4M1O00189 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
AP4M1O00189 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
AP4M1O00189 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
AP4M1O00189 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.78□□□□□ -0.2
AP4M1O00189 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
AP4M1O00189 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.78□□□□□ -0.2
AP4M1O00189 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.78□□□□□ -0.2
AP4M1O00189 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.78□□□□□ -0.2
AP4M1O00189 NKAPP1-205ENST00000585790 367 ntBASIC13.78□□□□□ -0.2
AP4M1O00189 AL773604.1-201ENST00000617417 272 ntBASIC13.78□□□□□ -0.2
AP4M1O00189 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
AP4M1O00189 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.78□□□□□ -0.2
AP4M1O00189 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP4M1O00189 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP4M1O00189 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.78□□□□□ -0.2
AP4M1O00189 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP4M1O00189 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
AP4M1O00189 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP4M1O00189 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.78□□□□□ -0.2
AP4M1O00189 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP4M1O00189 REXO1L11P-201ENST00000620964 1927 ntBASIC13.78□□□□□ -0.2
AP4M1O00189 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
AP4M1O00189 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
AP4M1O00189 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
AP4M1O00189 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP4M1O00189 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP4M1O00189 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
AP4M1O00189 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
AP4M1O00189 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.77□□□□□ -0.2
AP4M1O00189 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
AP4M1O00189 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
AP4M1O00189 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
AP4M1O00189 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.77□□□□□ -0.21
AP4M1O00189 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.77□□□□□ -0.21
AP4M1O00189 AL355312.1-201ENST00000407115 2176 ntBASIC13.77□□□□□ -0.21
AP4M1O00189 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.77□□□□□ -0.21
AP4M1O00189 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
AP4M1O00189 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
AP4M1O00189 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
AP4M1O00189 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.77□□□□□ -0.21
AP4M1O00189 PRYP5-201ENST00000451909 266 ntBASIC13.77□□□□□ -0.21
AP4M1O00189 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.77□□□□□ -0.21
AP4M1O00189 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 AC093909.1-201ENST00000504731 1122 ntBASIC13.77□□□□□ -0.21
AP4M1O00189 RNPS1P1-201ENST00000507437 918 ntBASIC13.77□□□□□ -0.21
AP4M1O00189 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.77□□□□□ -0.21
AP4M1O00189 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.77□□□□□ -0.21
AP4M1O00189 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.77□□□□□ -0.21
AP4M1O00189 SART3-203ENST00000546611 1184 ntBASIC13.77□□□□□ -0.21
AP4M1O00189 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.77□□□□□ -0.21
AP4M1O00189 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
AP4M1O00189 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.77□□□□□ -0.21
AP4M1O00189 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.77□□□□□ -0.21
AP4M1O00189 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 AC009336.1-201ENST00000608941 1553 ntBASIC13.77□□□□□ -0.21
AP4M1O00189 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.77□□□□□ -0.21
AP4M1O00189 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.77□□□□□ -0.21
AP4M1O00189 TP73-AS1-207ENST00000624167 988 ntBASIC13.77□□□□□ -0.21
AP4M1O00189 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
AP4M1O00189 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.77□□□□□ -0.21
AP4M1O00189 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.77□□□□□ -0.21
AP4M1O00189 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.77□□□□□ -0.21
AP4M1O00189 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP4M1O00189 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4M1O00189 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4M1O00189 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP4M1O00189 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
AP4M1O00189 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP4M1O00189 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
AP4M1O00189 LINC00304-203ENST00000565008 1864 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms