Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 AC092919.2-201ENST00000623631 1645 ntBASIC14.46□□□□□ -0.09
SHISA3A0PJX4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 AL137013.1-201ENST00000432946 1228 ntBASIC14.46□□□□□ -0.09
SHISA3A0PJX4 FAM210CP-201ENST00000445714 574 ntBASIC14.46□□□□□ -0.09
SHISA3A0PJX4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.46□□□□□ -0.09
SHISA3A0PJX4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 AL353135.1-201ENST00000606729 504 ntBASIC14.46□□□□□ -0.09
SHISA3A0PJX4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHISA3A0PJX4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.46□□□□□ -0.1
SHISA3A0PJX4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHISA3A0PJX4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHISA3A0PJX4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHISA3A0PJX4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SHISA3A0PJX4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SHISA3A0PJX4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.46□□□□□ -0.1
SHISA3A0PJX4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.46□□□□□ -0.1
SHISA3A0PJX4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.46□□□□□ -0.1
SHISA3A0PJX4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHISA3A0PJX4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHISA3A0PJX4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.46□□□□□ -0.1
SHISA3A0PJX4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.46□□□□□ -0.1
SHISA3A0PJX4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHISA3A0PJX4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 AC011498.5-201ENST00000592027 486 ntBASIC14.45□□□□□ -0.1
SHISA3A0PJX4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.45□□□□□ -0.1
SHISA3A0PJX4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 AL590326.2-201ENST00000625139 305 ntBASIC14.45□□□□□ -0.1
SHISA3A0PJX4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHISA3A0PJX4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms