Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC023141.13-201ENST00000604991 943 ntBASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AL513190.1-201ENST00000621254 727 ntBASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AL513523.2-202ENST00000427283 2040 ntBASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SNHG9-202ENST00000564014 471 ntBASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AP001160.2-201ENST00000596071 487 ntBASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AL596442.2-201ENST00000610240 980 ntBASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 C20orf181-201ENST00000623918 480 ntBASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC010507.1-201ENST00000633895 436 ntBASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AL391256.1-201ENST00000443260 1855 ntBASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.35□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AL645728.1-201ENST00000366221 2101 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms