Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
THUMPD1Q9NXG2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
THUMPD1Q9NXG2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
THUMPD1Q9NXG2 REXO1L3P-201ENST00000622202 1288 ntBASIC15.66■□□□□ 0.1
THUMPD1Q9NXG2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.66■□□□□ 0.1
THUMPD1Q9NXG2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.66■□□□□ 0.1
THUMPD1Q9NXG2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
THUMPD1Q9NXG2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.66■□□□□ 0.1
THUMPD1Q9NXG2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD1Q9NXG2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.66■□□□□ 0.1
THUMPD1Q9NXG2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD1Q9NXG2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
THUMPD1Q9NXG2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
THUMPD1Q9NXG2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
THUMPD1Q9NXG2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.66■□□□□ 0.1
THUMPD1Q9NXG2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 AC131009.4-201ENST00000624048 1740 ntBASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 SAPCD2P3-201ENST00000455031 850 ntBASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 SART3-203ENST00000546611 1184 ntBASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 PRELID1P1-202ENST00000567272 903 ntBASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 AC129492.6-201ENST00000611383 1305 ntBASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
THUMPD1Q9NXG2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 AC005412.3-201ENST00000580309 715 ntBASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD1Q9NXG2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD1Q9NXG2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.63■□□□□ 0.09
THUMPD1Q9NXG2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD1Q9NXG2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD1Q9NXG2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD1Q9NXG2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD1Q9NXG2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD1Q9NXG2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms