Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 AC073648.2-201ENST00000510116 352 ntBASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 NKAPP1-205ENST00000585790 367 ntBASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 AC064862.7-201ENST00000604520 867 ntBASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 TSPY26P-202ENST00000565928 3884 ntBASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 AC097637.2-201ENST00000624096 1997 ntBASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 AC148477.5-201ENST00000625164 1645 ntBASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 AF186996.4-201ENST00000467186 377 ntBASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 AL160237.2-201ENST00000556165 472 ntBASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 AC013467.2-201ENST00000605472 835 ntBASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 AL031008.1-201ENST00000619963 541 ntBASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
LIN7CQ9NUP9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
LIN7CQ9NUP9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.83□□□□□ -0.19
LIN7CQ9NUP9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms