Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CD248Q9HCU0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
CD248Q9HCU0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CD248Q9HCU0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CD248Q9HCU0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.51■□□□□ 0.39
CD248Q9HCU0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 MYCLP1-201ENST00000372451 1075 ntBASIC17.51■□□□□ 0.39
CD248Q9HCU0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CD248Q9HCU0 AC254562.1-201ENST00000417586 456 ntBASIC17.51■□□□□ 0.39
CD248Q9HCU0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.51■□□□□ 0.39
CD248Q9HCU0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.51■□□□□ 0.39
CD248Q9HCU0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
CD248Q9HCU0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.51■□□□□ 0.39
CD248Q9HCU0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.51■□□□□ 0.39
CD248Q9HCU0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CD248Q9HCU0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.51■□□□□ 0.39
CD248Q9HCU0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CD248Q9HCU0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.51■□□□□ 0.39
CD248Q9HCU0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD248Q9HCU0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 AL590787.1-201ENST00000568856 1315 ntBASIC17.5■□□□□ 0.39
CD248Q9HCU0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CD248Q9HCU0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CD248Q9HCU0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.5■□□□□ 0.39
CD248Q9HCU0 ACTG1P4-201ENST00000425123 1122 ntBASIC17.5■□□□□ 0.39
CD248Q9HCU0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.5■□□□□ 0.39
CD248Q9HCU0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.5■□□□□ 0.39
CD248Q9HCU0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.5■□□□□ 0.39
CD248Q9HCU0 KRT19P2-202ENST00000557173 1012 ntBASIC17.5■□□□□ 0.39
CD248Q9HCU0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.5■□□□□ 0.39
CD248Q9HCU0 AL078644.1-201ENST00000609881 752 ntBASIC17.5■□□□□ 0.39
CD248Q9HCU0 AL596442.2-201ENST00000610240 980 ntBASIC17.5■□□□□ 0.39
CD248Q9HCU0 GGTLC5P-201ENST00000617623 998 ntBASIC17.5■□□□□ 0.39
CD248Q9HCU0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CD248Q9HCU0 AC004877.2-201ENST00000623941 599 ntBASIC17.5■□□□□ 0.39
CD248Q9HCU0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CD248Q9HCU0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CD248Q9HCU0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 OR6D1P-203ENST00000641209 4860 ntBASIC17.5■□□□□ 0.39
CD248Q9HCU0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.5■□□□□ 0.39
CD248Q9HCU0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.5■□□□□ 0.39
CD248Q9HCU0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CD248Q9HCU0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD248Q9HCU0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.5■□□□□ 0.39
CD248Q9HCU0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD248Q9HCU0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD248Q9HCU0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD248Q9HCU0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD248Q9HCU0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CD248Q9HCU0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.49■□□□□ 0.39
CD248Q9HCU0 ELL2P1-201ENST00000413990 1906 ntBASIC17.49■□□□□ 0.39
CD248Q9HCU0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD248Q9HCU0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.49■□□□□ 0.39
CD248Q9HCU0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CD248Q9HCU0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD248Q9HCU0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD248Q9HCU0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD248Q9HCU0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD248Q9HCU0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD248Q9HCU0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.49■□□□□ 0.39
CD248Q9HCU0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CD248Q9HCU0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms