Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17■□□□□ 0.31
SP110Q9HB58 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17■□□□□ 0.31
SP110Q9HB58 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SP110Q9HB58 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17■□□□□ 0.31
SP110Q9HB58 AP002472.1-201ENST00000577490 586 ntBASIC17■□□□□ 0.31
SP110Q9HB58 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17■□□□□ 0.31
SP110Q9HB58 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SP110Q9HB58 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17■□□□□ 0.31
SP110Q9HB58 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17■□□□□ 0.31
SP110Q9HB58 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17■□□□□ 0.31
SP110Q9HB58 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
SP110Q9HB58 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SP110Q9HB58 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
SP110Q9HB58 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SP110Q9HB58 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SP110Q9HB58 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17■□□□□ 0.31
SP110Q9HB58 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17■□□□□ 0.31
SP110Q9HB58 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP110Q9HB58 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.99■□□□□ 0.31
SP110Q9HB58 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SP110Q9HB58 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP110Q9HB58 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SP110Q9HB58 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP110Q9HB58 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP110Q9HB58 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP110Q9HB58 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP110Q9HB58 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SP110Q9HB58 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.99■□□□□ 0.31
SP110Q9HB58 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SP110Q9HB58 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP110Q9HB58 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SP110Q9HB58 FAM58CP-201ENST00000435741 640 ntBASIC16.99■□□□□ 0.31
SP110Q9HB58 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.99■□□□□ 0.31
SP110Q9HB58 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SP110Q9HB58 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.99■□□□□ 0.31
SP110Q9HB58 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
SP110Q9HB58 MTDHP5-201ENST00000598980 586 ntBASIC16.99■□□□□ 0.31
SP110Q9HB58 AC091812.2-201ENST00000619081 385 ntBASIC16.99■□□□□ 0.31
SP110Q9HB58 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP110Q9HB58 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.99■□□□□ 0.31
SP110Q9HB58 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP110Q9HB58 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
SP110Q9HB58 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SP110Q9HB58 GPAA1P2-202ENST00000606848 1787 ntBASIC16.99■□□□□ 0.31
SP110Q9HB58 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SP110Q9HB58 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SP110Q9HB58 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP110Q9HB58 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SP110Q9HB58 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP110Q9HB58 GGT4P-201ENST00000623672 1708 ntBASIC16.99■□□□□ 0.31
SP110Q9HB58 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP110Q9HB58 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SP110Q9HB58 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.98■□□□□ 0.31
SP110Q9HB58 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP110Q9HB58 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SP110Q9HB58 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP110Q9HB58 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP110Q9HB58 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP110Q9HB58 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SP110Q9HB58 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SP110Q9HB58 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
SP110Q9HB58 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SP110Q9HB58 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP110Q9HB58 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP110Q9HB58 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SP110Q9HB58 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.98■□□□□ 0.31
SP110Q9HB58 AC084018.2-201ENST00000613093 2607 ntBASIC16.98■□□□□ 0.31
SP110Q9HB58 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SP110Q9HB58 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP110Q9HB58 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.98■□□□□ 0.31
SP110Q9HB58 YBX2P1-201ENST00000394192 760 ntBASIC16.98■□□□□ 0.31
SP110Q9HB58 BX842568.4-201ENST00000421222 227 ntBASIC16.98■□□□□ 0.31
SP110Q9HB58 DNAJB3-201ENST00000446806 729 ntBASIC16.98■□□□□ 0.31
SP110Q9HB58 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SP110Q9HB58 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.98■□□□□ 0.31
SP110Q9HB58 AL078644.1-201ENST00000609881 752 ntBASIC16.98■□□□□ 0.31
SP110Q9HB58 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.98■□□□□ 0.31
SP110Q9HB58 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SP110Q9HB58 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.98■□□□□ 0.31
SP110Q9HB58 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP110Q9HB58 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.98■□□□□ 0.31
SP110Q9HB58 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.98■□□□□ 0.31
SP110Q9HB58 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.98■□□□□ 0.31
SP110Q9HB58 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP110Q9HB58 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.98■□□□□ 0.31
SP110Q9HB58 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.98■□□□□ 0.31
SP110Q9HB58 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP110Q9HB58 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP110Q9HB58 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.98■□□□□ 0.31
SP110Q9HB58 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SP110Q9HB58 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SP110Q9HB58 GGT3P-204ENST00000453783 1664 ntBASIC16.97■□□□□ 0.31
SP110Q9HB58 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.97■□□□□ 0.31
SP110Q9HB58 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SP110Q9HB58 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SP110Q9HB58 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SP110Q9HB58 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.97■□□□□ 0.31
SP110Q9HB58 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.97■□□□□ 0.31
SP110Q9HB58 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SP110Q9HB58 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms