Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
POLR2J3Q9H1A7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 AC024909.3-201ENST00000611513 2257 ntBASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 AL596257.1-201ENST00000641463 2694 ntBASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 FGFR3P6-201ENST00000457012 610 ntBASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 MTDHP4-201ENST00000600287 670 ntBASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 AC093458.2-201ENST00000623150 629 ntBASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
POLR2J3Q9H1A7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 SNX33P1-201ENST00000592116 1762 ntBASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 LINC00554-201ENST00000564841 3011 ntBASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 ARMC10P1-201ENST00000313754 855 ntBASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 KRT18P31-201ENST00000506277 1292 ntBASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 AC006557.2-201ENST00000592985 1240 ntBASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 AL732292.2-201ENST00000609649 430 ntBASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 NORAD-201ENST00000565493 5339 ntBASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms