Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 NKILA-202ENST00000614771 2598 ntBASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 AC243562.1-201ENST00000560672 389 ntBASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 AC073389.1-201ENST00000595595 795 ntBASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 AC022145.2-201ENST00000598203 171 ntBASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 AC134684.3-201ENST00000641758 218 ntBASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM62Q9BVG3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 AL592309.1-201ENST00000443127 649 ntBASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 KRT8P48-201ENST00000515599 1220 ntBASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 SNHG9-202ENST00000564014 471 ntBASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 AC055717.3-201ENST00000622967 595 ntBASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM62Q9BVG3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM62Q9BVG3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM62Q9BVG3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms