Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM12Q96EX1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM12Q96EX1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
SMIM12Q96EX1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM12Q96EX1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM12Q96EX1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.7□□□□□ -0.38
SMIM12Q96EX1 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SMIM12Q96EX1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM12Q96EX1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SMIM12Q96EX1 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM12Q96EX1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM12Q96EX1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SMIM12Q96EX1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM12Q96EX1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM12Q96EX1 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 INGX-201ENST00000359239 846 ntBASIC12.69□□□□□ -0.38
SMIM12Q96EX1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 KLF4P1-201ENST00000412782 1185 ntBASIC12.69□□□□□ -0.38
SMIM12Q96EX1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 AL031432.5-201ENST00000641059 760 ntBASIC12.69□□□□□ -0.38
SMIM12Q96EX1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 AC125634.1-201ENST00000438758 1403 ntBASIC12.69□□□□□ -0.38
SMIM12Q96EX1 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 AC097376.2-205ENST00000610159 5334 ntBASIC12.69□□□□□ -0.38
SMIM12Q96EX1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM12Q96EX1 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 MIR662-201ENST00000384847 95 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms