Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CCDC60Q8IWA6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC60Q8IWA6 AC093214.1-201ENST00000511688 1107 ntBASIC18.36■□□□□ 0.53
CCDC60Q8IWA6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC60Q8IWA6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC60Q8IWA6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC60Q8IWA6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC60Q8IWA6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC60Q8IWA6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC60Q8IWA6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC60Q8IWA6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 PCGF3-213ENST00000620529 1899 ntBASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 AL096865.1-201ENST00000606796 927 ntBASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 AC003101.2-201ENST00000612557 442 ntBASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 AC092171.3-201ENST00000610122 2651 ntBASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC60Q8IWA6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 AC092580.3-201ENST00000430932 139 ntBASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 AC069120.2-201ENST00000524091 540 ntBASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 AL158211.3-201ENST00000607385 239 ntBASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 AC007967.4-201ENST00000614700 386 ntBASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC60Q8IWA6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC60Q8IWA6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CCDC60Q8IWA6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC60Q8IWA6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
CCDC60Q8IWA6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC60Q8IWA6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC60Q8IWA6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC60Q8IWA6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC60Q8IWA6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC60Q8IWA6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms