Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 ADH5P3-201ENST00000433842 1137 ntBASIC17.41■□□□□ 0.38
ALYREFQ86V81 RBPMS2P1-201ENST00000437762 623 ntBASIC17.41■□□□□ 0.38
ALYREFQ86V81 SPDYE11-202ENST00000450699 704 ntBASIC17.41■□□□□ 0.38
ALYREFQ86V81 KRT8P48-201ENST00000515599 1220 ntBASIC17.41■□□□□ 0.38
ALYREFQ86V81 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 TP53TG3HP-202ENST00000569755 579 ntBASIC17.41■□□□□ 0.38
ALYREFQ86V81 SPDYE9P-201ENST00000570642 692 ntBASIC17.41■□□□□ 0.38
ALYREFQ86V81 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 SPDYE10P-202ENST00000612005 668 ntBASIC17.41■□□□□ 0.38
ALYREFQ86V81 SPDYE8P-202ENST00000612377 668 ntBASIC17.41■□□□□ 0.38
ALYREFQ86V81 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALYREFQ86V81 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ALYREFQ86V81 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.4■□□□□ 0.38
ALYREFQ86V81 AC008677.1-201ENST00000519230 1561 ntBASIC17.4■□□□□ 0.38
ALYREFQ86V81 AL162727.3-201ENST00000635661 2787 ntBASIC17.4■□□□□ 0.38
ALYREFQ86V81 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ALYREFQ86V81 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ALYREFQ86V81 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.4■□□□□ 0.38
ALYREFQ86V81 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
ALYREFQ86V81 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.4■□□□□ 0.38
ALYREFQ86V81 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 MRPS18AP1-201ENST00000414458 589 ntBASIC17.4■□□□□ 0.38
ALYREFQ86V81 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.4■□□□□ 0.38
ALYREFQ86V81 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.4■□□□□ 0.38
ALYREFQ86V81 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.4■□□□□ 0.38
ALYREFQ86V81 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.4■□□□□ 0.38
ALYREFQ86V81 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.4■□□□□ 0.38
ALYREFQ86V81 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.4■□□□□ 0.38
ALYREFQ86V81 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ALYREFQ86V81 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.4■□□□□ 0.38
ALYREFQ86V81 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ALYREFQ86V81 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.4■□□□□ 0.38
ALYREFQ86V81 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALYREFQ86V81 AC092919.2-201ENST00000623631 1645 ntBASIC17.39■□□□□ 0.38
ALYREFQ86V81 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ALYREFQ86V81 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.39■□□□□ 0.37
ALYREFQ86V81 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.39■□□□□ 0.37
ALYREFQ86V81 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ALYREFQ86V81 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALYREFQ86V81 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
ALYREFQ86V81 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALYREFQ86V81 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALYREFQ86V81 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ALYREFQ86V81 LINC02199-201ENST00000506655 2702 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms