Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBE3BQ7Z3V4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.59■□□□□ 0.89
UBE3BQ7Z3V4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE3BQ7Z3V4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE3BQ7Z3V4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 AC106886.4-201ENST00000623557 2502 ntBASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 UGT1A2P-201ENST00000454886 866 ntBASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 INGX-202ENST00000489074 768 ntBASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 AJ011932.1-201ENST00000621707 465 ntBASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.58■□□□□ 0.89
UBE3BQ7Z3V4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBE3BQ7Z3V4 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.58■□□□□ 0.88
UBE3BQ7Z3V4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBE3BQ7Z3V4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.58■□□□□ 0.88
UBE3BQ7Z3V4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 SPDYE12P-201ENST00000618416 771 ntBASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.57■□□□□ 0.88
UBE3BQ7Z3V4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 PCGF3-213ENST00000620529 1899 ntBASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 BANF1P1-201ENST00000553684 263 ntBASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 MIR4745-201ENST00000577608 62 ntBASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 GGT3P-204ENST00000453783 1664 ntBASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 AL589702.1-201ENST00000641229 1509 ntBASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.56■□□□□ 0.88
UBE3BQ7Z3V4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE3BQ7Z3V4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE3BQ7Z3V4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE3BQ7Z3V4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE3BQ7Z3V4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE3BQ7Z3V4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE3BQ7Z3V4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
UBE3BQ7Z3V4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE3BQ7Z3V4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE3BQ7Z3V4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBE3BQ7Z3V4 AL353705.2-201ENST00000428243 662 ntBASIC20.55■□□□□ 0.88
UBE3BQ7Z3V4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBE3BQ7Z3V4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBE3BQ7Z3V4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms