Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.92□□□□□ -0.34
KCNIP4Q6PIL6 AP000692.2-201ENST00000608391 879 ntBASIC12.92□□□□□ -0.34
KCNIP4Q6PIL6 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP4Q6PIL6 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP4Q6PIL6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.92□□□□□ -0.34
KCNIP4Q6PIL6 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP4Q6PIL6 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.92□□□□□ -0.34
KCNIP4Q6PIL6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
KCNIP4Q6PIL6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP4Q6PIL6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
KCNIP4Q6PIL6 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP4Q6PIL6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP4Q6PIL6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP4Q6PIL6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
KCNIP4Q6PIL6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.92□□□□□ -0.34
KCNIP4Q6PIL6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.92□□□□□ -0.34
KCNIP4Q6PIL6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 AL645728.1-201ENST00000366221 2101 ntBASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 MIR4785-201ENST00000585005 73 ntBASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 AC002310.6-201ENST00000624451 1377 ntBASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP4Q6PIL6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 ABHD17AP1-201ENST00000358206 933 ntBASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 KRT18P65-201ENST00000439811 1286 ntBASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 AC097488.1-201ENST00000507834 756 ntBASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 NUDT16P1-203ENST00000513809 620 ntBASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 TMEM191A-211ENST00000637163 1067 ntBASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms