Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HIST2H2AA3Q6FI13 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 GGT3P-204ENST00000453783 1664 ntBASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST2H2AA3Q6FI13 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 AL031731.1-201ENST00000642131 2094 ntBASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 AC096734.2-201ENST00000562054 433 ntBASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 AC020765.3-201ENST00000613051 740 ntBASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 ALOX12P2-203ENST00000570921 1945 ntBASIC16.04■□□□□ 0.16
HIST2H2AA3Q6FI13 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 AC104109.2-201ENST00000602919 1418 ntBASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms