Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.34■□□□□ 0.21
GTF2A1P52655 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.34■□□□□ 0.21
GTF2A1P52655 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.34■□□□□ 0.21
GTF2A1P52655 AC008403.3-201ENST00000598924 454 ntBASIC16.34■□□□□ 0.21
GTF2A1P52655 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.34■□□□□ 0.21
GTF2A1P52655 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.34■□□□□ 0.21
GTF2A1P52655 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
GTF2A1P52655 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.34■□□□□ 0.21
GTF2A1P52655 HTR7P1-201ENST00000538670 1336 ntBASIC16.34■□□□□ 0.21
GTF2A1P52655 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
GTF2A1P52655 AL390755.1-201ENST00000623716 2027 ntBASIC16.34■□□□□ 0.21
GTF2A1P52655 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GTF2A1P52655 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GTF2A1P52655 AL109954.1-202ENST00000564051 2148 ntBASIC16.34■□□□□ 0.21
GTF2A1P52655 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.34■□□□□ 0.21
GTF2A1P52655 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.34■□□□□ 0.21
GTF2A1P52655 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
GTF2A1P52655 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
GTF2A1P52655 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GTF2A1P52655 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.34■□□□□ 0.21
GTF2A1P52655 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GTF2A1P52655 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GTF2A1P52655 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.33■□□□□ 0.21
GTF2A1P52655 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
GTF2A1P52655 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
GTF2A1P52655 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GTF2A1P52655 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
GTF2A1P52655 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
GTF2A1P52655 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
GTF2A1P52655 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GTF2A1P52655 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC16.33■□□□□ 0.2
GTF2A1P52655 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GTF2A1P52655 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GTF2A1P52655 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GTF2A1P52655 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.33■□□□□ 0.2
GTF2A1P52655 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.33■□□□□ 0.2
GTF2A1P52655 AC069152.1-201ENST00000438030 544 ntBASIC16.33■□□□□ 0.2
GTF2A1P52655 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.33■□□□□ 0.2
GTF2A1P52655 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GTF2A1P52655 UNC93B5-201ENST00000530315 699 ntBASIC16.33■□□□□ 0.2
GTF2A1P52655 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GTF2A1P52655 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.33■□□□□ 0.2
GTF2A1P52655 MTDHP1-201ENST00000605323 784 ntBASIC16.33■□□□□ 0.2
GTF2A1P52655 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
GTF2A1P52655 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GTF2A1P52655 AC133041.1-202ENST00000642053 222 ntBASIC16.33■□□□□ 0.2
GTF2A1P52655 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GTF2A1P52655 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.33■□□□□ 0.2
GTF2A1P52655 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GTF2A1P52655 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GTF2A1P52655 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.33■□□□□ 0.2
GTF2A1P52655 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GTF2A1P52655 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GTF2A1P52655 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
GTF2A1P52655 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
GTF2A1P52655 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.33■□□□□ 0.2
GTF2A1P52655 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.33■□□□□ 0.2
GTF2A1P52655 AL596087.1-201ENST00000400979 1969 ntBASIC16.33■□□□□ 0.2
GTF2A1P52655 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GTF2A1P52655 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GTF2A1P52655 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
GTF2A1P52655 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GTF2A1P52655 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
GTF2A1P52655 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GTF2A1P52655 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.32■□□□□ 0.2
GTF2A1P52655 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
GTF2A1P52655 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GTF2A1P52655 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GTF2A1P52655 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
GTF2A1P52655 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GTF2A1P52655 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
GTF2A1P52655 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
GTF2A1P52655 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GTF2A1P52655 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GTF2A1P52655 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GTF2A1P52655 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GTF2A1P52655 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GTF2A1P52655 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GTF2A1P52655 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
GTF2A1P52655 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GTF2A1P52655 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.32■□□□□ 0.2
GTF2A1P52655 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.32■□□□□ 0.2
GTF2A1P52655 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.32■□□□□ 0.2
GTF2A1P52655 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.32■□□□□ 0.2
GTF2A1P52655 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.32■□□□□ 0.2
GTF2A1P52655 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.32■□□□□ 0.2
GTF2A1P52655 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GTF2A1P52655 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.32■□□□□ 0.2
GTF2A1P52655 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.32■□□□□ 0.2
GTF2A1P52655 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.32■□□□□ 0.2
GTF2A1P52655 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
GTF2A1P52655 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.32■□□□□ 0.2
GTF2A1P52655 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.32■□□□□ 0.2
GTF2A1P52655 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
GTF2A1P52655 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.32■□□□□ 0.2
GTF2A1P52655 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.32■□□□□ 0.2
GTF2A1P52655 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GTF2A1P52655 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GTF2A1P52655 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GTF2A1P52655 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms