Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6CP51160 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6CP51160 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE6CP51160 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.95■□□□□ 0.46
PDE6CP51160 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6CP51160 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6CP51160 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6CP51160 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE6CP51160 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6CP51160 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6CP51160 AC112482.1-201ENST00000492080 688 ntBASIC17.95■□□□□ 0.46
PDE6CP51160 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.95■□□□□ 0.46
PDE6CP51160 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.95■□□□□ 0.46
PDE6CP51160 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE6CP51160 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6CP51160 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.95■□□□□ 0.46
PDE6CP51160 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
PDE6CP51160 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.95■□□□□ 0.46
PDE6CP51160 MIR4492-201ENST00000581627 80 ntBASIC17.95■□□□□ 0.46
PDE6CP51160 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6CP51160 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.95■□□□□ 0.46
PDE6CP51160 AC007064.4-201ENST00000637740 555 ntBASIC17.95■□□□□ 0.46
PDE6CP51160 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PDE6CP51160 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6CP51160 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6CP51160 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6CP51160 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6CP51160 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PDE6CP51160 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.95■□□□□ 0.46
PDE6CP51160 AC129492.6-201ENST00000611383 1305 ntBASIC17.95■□□□□ 0.46
PDE6CP51160 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PDE6CP51160 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6CP51160 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6CP51160 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6CP51160 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.94■□□□□ 0.46
PDE6CP51160 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PDE6CP51160 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.94■□□□□ 0.46
PDE6CP51160 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6CP51160 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6CP51160 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6CP51160 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.94■□□□□ 0.46
PDE6CP51160 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6CP51160 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.94■□□□□ 0.46
PDE6CP51160 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PDE6CP51160 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6CP51160 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PDE6CP51160 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
PDE6CP51160 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.94■□□□□ 0.46
PDE6CP51160 AC004967.1-201ENST00000453589 447 ntBASIC17.94■□□□□ 0.46
PDE6CP51160 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.94■□□□□ 0.46
PDE6CP51160 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PDE6CP51160 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.94■□□□□ 0.46
PDE6CP51160 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6CP51160 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6CP51160 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.94■□□□□ 0.46
PDE6CP51160 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6CP51160 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6CP51160 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6CP51160 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6CP51160 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PDE6CP51160 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6CP51160 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6CP51160 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6CP51160 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6CP51160 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
PDE6CP51160 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6CP51160 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.94■□□□□ 0.46
PDE6CP51160 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PDE6CP51160 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
PDE6CP51160 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PDE6CP51160 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6CP51160 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6CP51160 SLC22A20-204ENST00000530038 1673 ntBASIC17.93■□□□□ 0.46
PDE6CP51160 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.93■□□□□ 0.46
PDE6CP51160 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
PDE6CP51160 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PDE6CP51160 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PDE6CP51160 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6CP51160 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6CP51160 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6CP51160 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PDE6CP51160 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.93■□□□□ 0.46
PDE6CP51160 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6CP51160 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.93■□□□□ 0.46
PDE6CP51160 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.93■□□□□ 0.46
PDE6CP51160 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.93■□□□□ 0.46
PDE6CP51160 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6CP51160 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.93■□□□□ 0.46
PDE6CP51160 AC005829.1-201ENST00000570002 483 ntBASIC17.93■□□□□ 0.46
PDE6CP51160 AC005412.3-201ENST00000580309 715 ntBASIC17.93■□□□□ 0.46
PDE6CP51160 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.93■□□□□ 0.46
PDE6CP51160 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.93■□□□□ 0.46
PDE6CP51160 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.93■□□□□ 0.46
PDE6CP51160 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6CP51160 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6CP51160 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6CP51160 SNX33P1-201ENST00000592116 1762 ntBASIC17.93■□□□□ 0.46
PDE6CP51160 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6CP51160 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PDE6CP51160 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms