Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 RPS15P9-201ENST00000494093 319 ntBASIC18.16■□□□□ 0.5
USP8P40818 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.16■□□□□ 0.5
USP8P40818 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.16■□□□□ 0.5
USP8P40818 AL031008.1-201ENST00000619963 541 ntBASIC18.16■□□□□ 0.5
USP8P40818 MIR1199-201ENST00000621445 119 ntBASIC18.16■□□□□ 0.5
USP8P40818 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.16■□□□□ 0.5
USP8P40818 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.16■□□□□ 0.5
USP8P40818 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
USP8P40818 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.16■□□□□ 0.5
USP8P40818 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.16■□□□□ 0.5
USP8P40818 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
USP8P40818 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.16■□□□□ 0.5
USP8P40818 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.16■□□□□ 0.5
USP8P40818 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.16■□□□□ 0.5
USP8P40818 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
USP8P40818 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.16■□□□□ 0.5
USP8P40818 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.16■□□□□ 0.5
USP8P40818 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
USP8P40818 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.15■□□□□ 0.5
USP8P40818 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC18.15■□□□□ 0.5
USP8P40818 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.15■□□□□ 0.5
USP8P40818 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
USP8P40818 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
USP8P40818 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
USP8P40818 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
USP8P40818 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
USP8P40818 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.15■□□□□ 0.5
USP8P40818 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.15■□□□□ 0.5
USP8P40818 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.15■□□□□ 0.5
USP8P40818 KRT18P67-201ENST00000432816 1264 ntBASIC18.15■□□□□ 0.5
USP8P40818 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.15■□□□□ 0.5
USP8P40818 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 AC136632.2-201ENST00000512891 861 ntBASIC18.15■□□□□ 0.5
USP8P40818 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.15■□□□□ 0.5
USP8P40818 KRT126P-201ENST00000549467 1181 ntBASIC18.15■□□□□ 0.5
USP8P40818 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.15■□□□□ 0.5
USP8P40818 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.15■□□□□ 0.5
USP8P40818 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.15■□□□□ 0.5
USP8P40818 AC008735.5-201ENST00000623544 497 ntBASIC18.15■□□□□ 0.5
USP8P40818 AL805961.1-202ENST00000641562 540 ntBASIC18.15■□□□□ 0.5
USP8P40818 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.15■□□□□ 0.5
USP8P40818 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.15■□□□□ 0.5
USP8P40818 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
USP8P40818 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
USP8P40818 AL662844.4-201ENST00000606367 2838 ntBASIC18.15■□□□□ 0.5
USP8P40818 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.15■□□□□ 0.5
USP8P40818 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.15■□□□□ 0.5
USP8P40818 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.15■□□□□ 0.5
USP8P40818 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP8P40818 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
USP8P40818 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
USP8P40818 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
USP8P40818 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
USP8P40818 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
USP8P40818 AP002414.3-201ENST00000589352 1468 ntBASIC18.14■□□□□ 0.5
USP8P40818 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.14■□□□□ 0.5
USP8P40818 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
USP8P40818 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP8P40818 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.14■□□□□ 0.49
USP8P40818 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP8P40818 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP8P40818 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
USP8P40818 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
USP8P40818 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP8P40818 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP8P40818 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.14■□□□□ 0.49
USP8P40818 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.14■□□□□ 0.49
USP8P40818 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.14■□□□□ 0.49
USP8P40818 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP8P40818 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.14■□□□□ 0.49
USP8P40818 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.14■□□□□ 0.49
USP8P40818 AC105339.3-201ENST00000560043 636 ntBASIC18.14■□□□□ 0.49
USP8P40818 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
USP8P40818 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms