Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.46■□□□□ 0.39
GRIK1P39086 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.46■□□□□ 0.39
GRIK1P39086 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
GRIK1P39086 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GRIK1P39086 PRYP6-201ENST00000514804 343 ntBASIC17.46■□□□□ 0.39
GRIK1P39086 AC105233.2-201ENST00000523697 349 ntBASIC17.46■□□□□ 0.39
GRIK1P39086 AF228730.5-201ENST00000530288 346 ntBASIC17.46■□□□□ 0.39
GRIK1P39086 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
GRIK1P39086 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.46■□□□□ 0.39
GRIK1P39086 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GRIK1P39086 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
GRIK1P39086 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GRIK1P39086 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GRIK1P39086 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.46■□□□□ 0.39
GRIK1P39086 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
GRIK1P39086 AC080080.1-201ENST00000625121 2420 ntBASIC17.46■□□□□ 0.38
GRIK1P39086 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
GRIK1P39086 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GRIK1P39086 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GRIK1P39086 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GRIK1P39086 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GRIK1P39086 AC006538.1-201ENST00000567905 1585 ntBASIC17.45■□□□□ 0.38
GRIK1P39086 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GRIK1P39086 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.45■□□□□ 0.38
GRIK1P39086 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
GRIK1P39086 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GRIK1P39086 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GRIK1P39086 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GRIK1P39086 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
GRIK1P39086 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.45■□□□□ 0.38
GRIK1P39086 FAM86GP-201ENST00000448322 971 ntBASIC17.45■□□□□ 0.38
GRIK1P39086 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.45■□□□□ 0.38
GRIK1P39086 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.45■□□□□ 0.38
GRIK1P39086 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.45■□□□□ 0.38
GRIK1P39086 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.45■□□□□ 0.38
GRIK1P39086 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.45■□□□□ 0.38
GRIK1P39086 AC026150.2-201ENST00000564693 1156 ntBASIC17.45■□□□□ 0.38
GRIK1P39086 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
GRIK1P39086 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GRIK1P39086 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GRIK1P39086 AP001059.3-201ENST00000619053 235 ntBASIC17.45■□□□□ 0.38
GRIK1P39086 Z92544.3-201ENST00000624747 417 ntBASIC17.45■□□□□ 0.38
GRIK1P39086 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.45■□□□□ 0.38
GRIK1P39086 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GRIK1P39086 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
GRIK1P39086 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
GRIK1P39086 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GRIK1P39086 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
GRIK1P39086 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GRIK1P39086 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
GRIK1P39086 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
GRIK1P39086 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
GRIK1P39086 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
GRIK1P39086 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.45■□□□□ 0.38
GRIK1P39086 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.44■□□□□ 0.38
GRIK1P39086 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
GRIK1P39086 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.44■□□□□ 0.38
GRIK1P39086 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.44■□□□□ 0.38
GRIK1P39086 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.44■□□□□ 0.38
GRIK1P39086 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GRIK1P39086 AC073439.1-201ENST00000624121 1774 ntBASIC17.44■□□□□ 0.38
GRIK1P39086 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.44■□□□□ 0.38
GRIK1P39086 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
GRIK1P39086 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.44■□□□□ 0.38
GRIK1P39086 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.44■□□□□ 0.38
GRIK1P39086 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.44■□□□□ 0.38
GRIK1P39086 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.44■□□□□ 0.38
GRIK1P39086 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.44■□□□□ 0.38
GRIK1P39086 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 AL031731.1-201ENST00000642131 2094 ntBASIC17.44■□□□□ 0.38
GRIK1P39086 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
GRIK1P39086 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.44■□□□□ 0.38
GRIK1P39086 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.44■□□□□ 0.38
GRIK1P39086 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GRIK1P39086 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
GRIK1P39086 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
GRIK1P39086 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GRIK1P39086 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
GRIK1P39086 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
GRIK1P39086 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
GRIK1P39086 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GRIK1P39086 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GRIK1P39086 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms