Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A4P31645 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A4P31645 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC6A4P31645 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A4P31645 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC6A4P31645 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A4P31645 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A4P31645 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A4P31645 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SLC6A4P31645 PCGF3-213ENST00000620529 1899 ntBASIC16.97■□□□□ 0.31
SLC6A4P31645 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC6A4P31645 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A4P31645 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A4P31645 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SLC6A4P31645 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SLC6A4P31645 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A4P31645 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A4P31645 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A4P31645 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A4P31645 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC6A4P31645 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC6A4P31645 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC6A4P31645 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC6A4P31645 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC6A4P31645 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC6A4P31645 AC093724.1-201ENST00000448659 1027 ntBASIC16.97■□□□□ 0.31
SLC6A4P31645 AC069262.1-201ENST00000539058 672 ntBASIC16.97■□□□□ 0.31
SLC6A4P31645 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A4P31645 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC6A4P31645 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A4P31645 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A4P31645 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SLC6A4P31645 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A4P31645 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A4P31645 AC008677.1-201ENST00000519230 1561 ntBASIC16.97■□□□□ 0.31
SLC6A4P31645 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A4P31645 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A4P31645 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC6A4P31645 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC6A4P31645 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC6A4P31645 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SLC6A4P31645 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC6A4P31645 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLC6A4P31645 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A4P31645 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A4P31645 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A4P31645 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.96■□□□□ 0.31
SLC6A4P31645 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A4P31645 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A4P31645 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC6A4P31645 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A4P31645 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC6A4P31645 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A4P31645 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A4P31645 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC6A4P31645 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A4P31645 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC6A4P31645 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A4P31645 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
SLC6A4P31645 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC6A4P31645 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.96■□□□□ 0.31
SLC6A4P31645 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC6A4P31645 AL355385.1-201ENST00000606123 409 ntBASIC16.96■□□□□ 0.31
SLC6A4P31645 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC6A4P31645 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A4P31645 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC6A4P31645 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A4P31645 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC6A4P31645 AP3S2-216ENST00000617003 1561 ntBASIC16.96■□□□□ 0.31
SLC6A4P31645 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A4P31645 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A4P31645 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A4P31645 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC6A4P31645 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A4P31645 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC6A4P31645 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC6A4P31645 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC6A4P31645 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.96■□□□□ 0.3
SLC6A4P31645 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
SLC6A4P31645 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.96■□□□□ 0.3
SLC6A4P31645 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SLC6A4P31645 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC6A4P31645 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC6A4P31645 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC6A4P31645 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A4P31645 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC6A4P31645 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A4P31645 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A4P31645 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A4P31645 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SLC6A4P31645 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC6A4P31645 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A4P31645 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A4P31645 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A4P31645 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A4P31645 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC6A4P31645 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC6A4P31645 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A4P31645 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.95■□□□□ 0.3
SLC6A4P31645 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms