Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCLP18206 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCLP18206 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.74■□□□□ 0.27
VCLP18206 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.74■□□□□ 0.27
VCLP18206 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.74■□□□□ 0.27
VCLP18206 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCLP18206 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.74■□□□□ 0.27
VCLP18206 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCLP18206 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.74■□□□□ 0.27
VCLP18206 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCLP18206 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCLP18206 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
VCLP18206 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.74■□□□□ 0.27
VCLP18206 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
VCLP18206 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.74■□□□□ 0.27
VCLP18206 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.74■□□□□ 0.27
VCLP18206 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
VCLP18206 AC105917.1-201ENST00000506637 2539 ntBASIC16.74■□□□□ 0.27
VCLP18206 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.74■□□□□ 0.27
VCLP18206 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCLP18206 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCLP18206 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCLP18206 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
VCLP18206 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCLP18206 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCLP18206 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.74■□□□□ 0.27
VCLP18206 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCLP18206 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCLP18206 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
VCLP18206 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.73■□□□□ 0.27
VCLP18206 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
VCLP18206 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
VCLP18206 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.73■□□□□ 0.27
VCLP18206 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.73■□□□□ 0.27
VCLP18206 HCG4B-203ENST00000450128 991 ntBASIC16.73■□□□□ 0.27
VCLP18206 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.73■□□□□ 0.27
VCLP18206 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.73■□□□□ 0.27
VCLP18206 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
VCLP18206 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.73■□□□□ 0.27
VCLP18206 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.73■□□□□ 0.27
VCLP18206 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.73■□□□□ 0.27
VCLP18206 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.73■□□□□ 0.27
VCLP18206 AC040169.1-201ENST00000565382 521 ntBASIC16.73■□□□□ 0.27
VCLP18206 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.73■□□□□ 0.27
VCLP18206 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.73■□□□□ 0.27
VCLP18206 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
VCLP18206 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 AL021920.2-201ENST00000624828 1351 ntBASIC16.73■□□□□ 0.27
VCLP18206 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
VCLP18206 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.73■□□□□ 0.27
VCLP18206 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.73■□□□□ 0.27
VCLP18206 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
VCLP18206 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.73■□□□□ 0.27
VCLP18206 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VCLP18206 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCLP18206 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VCLP18206 TUBB8P12-201ENST00000308911 1335 ntBASIC16.72■□□□□ 0.27
VCLP18206 TUBB7P-202ENST00000428444 1305 ntBASIC16.72■□□□□ 0.27
VCLP18206 TUBB8P7-204ENST00000567960 1332 ntBASIC16.72■□□□□ 0.27
VCLP18206 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VCLP18206 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCLP18206 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.72■□□□□ 0.27
VCLP18206 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCLP18206 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VCLP18206 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VCLP18206 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.72■□□□□ 0.27
VCLP18206 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCLP18206 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
VCLP18206 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCLP18206 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.72■□□□□ 0.27
VCLP18206 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCLP18206 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCLP18206 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VCLP18206 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
VCLP18206 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
VCLP18206 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.72■□□□□ 0.27
VCLP18206 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.72■□□□□ 0.27
VCLP18206 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.72■□□□□ 0.27
VCLP18206 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.72■□□□□ 0.27
VCLP18206 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms