Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.91■□□□□ 0.3
CLDN11O75508 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN11O75508 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CLDN11O75508 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN11O75508 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN11O75508 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN11O75508 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN11O75508 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLDN11O75508 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN11O75508 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN11O75508 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLDN11O75508 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN11O75508 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN11O75508 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN11O75508 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN11O75508 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN11O75508 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN11O75508 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN11O75508 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN11O75508 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN11O75508 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN11O75508 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CLDN11O75508 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN11O75508 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN11O75508 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN11O75508 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
CLDN11O75508 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN11O75508 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN11O75508 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN11O75508 AC093724.1-201ENST00000448659 1027 ntBASIC16.9■□□□□ 0.3
CLDN11O75508 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN11O75508 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN11O75508 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN11O75508 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDN11O75508 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN11O75508 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDN11O75508 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN11O75508 LINC00628-201ENST00000628516 1289 ntBASIC16.9■□□□□ 0.3
CLDN11O75508 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN11O75508 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN11O75508 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN11O75508 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN11O75508 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN11O75508 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN11O75508 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN11O75508 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN11O75508 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN11O75508 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN11O75508 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN11O75508 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN11O75508 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CLDN11O75508 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.89■□□□□ 0.3
CLDN11O75508 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLDN11O75508 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLDN11O75508 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN11O75508 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN11O75508 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN11O75508 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN11O75508 AC011676.5-201ENST00000624864 2660 ntBASIC16.89■□□□□ 0.29
CLDN11O75508 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN11O75508 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN11O75508 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN11O75508 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
CLDN11O75508 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN11O75508 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN11O75508 AL139400.1-201ENST00000366220 510 ntBASIC16.89■□□□□ 0.29
CLDN11O75508 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CLDN11O75508 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN11O75508 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN11O75508 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.89■□□□□ 0.29
CLDN11O75508 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.89■□□□□ 0.29
CLDN11O75508 RBPMS2P1-201ENST00000437762 623 ntBASIC16.89■□□□□ 0.29
CLDN11O75508 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN11O75508 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN11O75508 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN11O75508 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN11O75508 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN11O75508 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN11O75508 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CLDN11O75508 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLDN11O75508 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CLDN11O75508 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN11O75508 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN11O75508 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.88■□□□□ 0.29
CLDN11O75508 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN11O75508 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN11O75508 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CLDN11O75508 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN11O75508 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN11O75508 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN11O75508 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN11O75508 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN11O75508 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN11O75508 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN11O75508 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDN11O75508 PMS2P2-201ENST00000425039 1128 ntBASIC16.88■□□□□ 0.29
CLDN11O75508 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDN11O75508 GPS2P2-201ENST00000430745 888 ntBASIC16.88■□□□□ 0.29
CLDN11O75508 AC098859.1-201ENST00000502915 1238 ntBASIC16.88■□□□□ 0.29
CLDN11O75508 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms