Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 AC006449.5-201ENST00000610658 2098 ntBASIC14.78□□□□□ -0.04
TRAF3IP2O43734 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 AL662844.4-201ENST00000606367 2838 ntBASIC14.78□□□□□ -0.04
TRAF3IP2O43734 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 AC020765.3-201ENST00000613051 740 ntBASIC14.78□□□□□ -0.04
TRAF3IP2O43734 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 AC092865.6-201ENST00000642101 219 ntBASIC14.78□□□□□ -0.04
TRAF3IP2O43734 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAF3IP2O43734 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAF3IP2O43734 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRAF3IP2O43734 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAF3IP2O43734 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAF3IP2O43734 AC092919.2-201ENST00000623631 1645 ntBASIC14.77□□□□□ -0.04
TRAF3IP2O43734 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.77□□□□□ -0.04
TRAF3IP2O43734 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.77□□□□□ -0.04
TRAF3IP2O43734 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAF3IP2O43734 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TRAF3IP2O43734 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TRAF3IP2O43734 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAF3IP2O43734 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TRAF3IP2O43734 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TRAF3IP2O43734 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAF3IP2O43734 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TRAF3IP2O43734 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 AC068137.2-201ENST00000605408 478 ntBASIC14.77□□□□□ -0.05
TRAF3IP2O43734 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 AC092364.2-201ENST00000596710 2692 ntBASIC14.77□□□□□ -0.05
TRAF3IP2O43734 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAF3IP2O43734 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms