Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
PCDH17O14917 AC107918.2-201ENST00000530817 355 ntBASIC15.88■□□□□ 0.13
PCDH17O14917 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDH17O14917 MIR4515-201ENST00000584082 81 ntBASIC15.88■□□□□ 0.13
PCDH17O14917 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDH17O14917 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
PCDH17O14917 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDH17O14917 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH17O14917 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDH17O14917 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH17O14917 AL021920.2-201ENST00000624828 1351 ntBASIC15.87■□□□□ 0.13
PCDH17O14917 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH17O14917 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH17O14917 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH17O14917 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH17O14917 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH17O14917 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
PCDH17O14917 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
PCDH17O14917 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PCDH17O14917 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCDH17O14917 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH17O14917 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCDH17O14917 AL353732.1-201ENST00000569618 1459 ntBASIC15.87■□□□□ 0.13
PCDH17O14917 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH17O14917 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH17O14917 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH17O14917 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDH17O14917 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH17O14917 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH17O14917 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDH17O14917 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDH17O14917 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCDH17O14917 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH17O14917 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDH17O14917 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH17O14917 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.87■□□□□ 0.13
PCDH17O14917 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH17O14917 REXO1L3P-201ENST00000622202 1288 ntBASIC15.87■□□□□ 0.13
PCDH17O14917 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH17O14917 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH17O14917 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PCDH17O14917 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH17O14917 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH17O14917 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH17O14917 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH17O14917 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PCDH17O14917 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH17O14917 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCDH17O14917 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH17O14917 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH17O14917 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH17O14917 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCDH17O14917 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH17O14917 TOP3BP1-201ENST00000420768 1380 ntBASIC15.87■□□□□ 0.13
PCDH17O14917 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH17O14917 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH17O14917 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PCDH17O14917 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH17O14917 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDH17O14917 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PCDH17O14917 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH17O14917 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH17O14917 AC026691.1-201ENST00000602502 2017 ntBASIC15.86■□□□□ 0.13
PCDH17O14917 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
PCDH17O14917 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH17O14917 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDH17O14917 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH17O14917 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDH17O14917 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH17O14917 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDH17O14917 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH17O14917 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDH17O14917 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH17O14917 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH17O14917 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms