Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 FGFR3P6-201ENST00000457012 610 ntBASIC17.65■□□□□ 0.42
RCCD1A6NED2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.65■□□□□ 0.42
RCCD1A6NED2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.65■□□□□ 0.42
RCCD1A6NED2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.65■□□□□ 0.42
RCCD1A6NED2 AL355877.3-201ENST00000622820 899 ntBASIC17.65■□□□□ 0.42
RCCD1A6NED2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.65■□□□□ 0.42
RCCD1A6NED2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RCCD1A6NED2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RCCD1A6NED2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RCCD1A6NED2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RCCD1A6NED2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.65■□□□□ 0.42
RCCD1A6NED2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RCCD1A6NED2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RCCD1A6NED2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.65■□□□□ 0.42
RCCD1A6NED2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RCCD1A6NED2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RCCD1A6NED2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
RCCD1A6NED2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RCCD1A6NED2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RCCD1A6NED2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.64■□□□□ 0.41
RCCD1A6NED2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.64■□□□□ 0.41
RCCD1A6NED2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.64■□□□□ 0.41
RCCD1A6NED2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.64■□□□□ 0.41
RCCD1A6NED2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.64■□□□□ 0.41
RCCD1A6NED2 AC132872.1-201ENST00000566986 1195 ntBASIC17.64■□□□□ 0.41
RCCD1A6NED2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.64■□□□□ 0.41
RCCD1A6NED2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RCCD1A6NED2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RCCD1A6NED2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.64■□□□□ 0.41
RCCD1A6NED2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 AC016027.1-202ENST00000607927 1699 ntBASIC17.64■□□□□ 0.41
RCCD1A6NED2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RCCD1A6NED2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.64■□□□□ 0.41
RCCD1A6NED2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.64■□□□□ 0.41
RCCD1A6NED2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RCCD1A6NED2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
RCCD1A6NED2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RCCD1A6NED2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.63■□□□□ 0.41
RCCD1A6NED2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RCCD1A6NED2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.63■□□□□ 0.41
RCCD1A6NED2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.63■□□□□ 0.41
RCCD1A6NED2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.63■□□□□ 0.41
RCCD1A6NED2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RCCD1A6NED2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.63■□□□□ 0.41
RCCD1A6NED2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.63■□□□□ 0.41
RCCD1A6NED2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.63■□□□□ 0.41
RCCD1A6NED2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.63■□□□□ 0.41
RCCD1A6NED2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.63■□□□□ 0.41
RCCD1A6NED2 AL805961.1-202ENST00000641562 540 ntBASIC17.63■□□□□ 0.41
RCCD1A6NED2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.63■□□□□ 0.41
RCCD1A6NED2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RCCD1A6NED2 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.63■□□□□ 0.41
RCCD1A6NED2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RCCD1A6NED2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RCCD1A6NED2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.63■□□□□ 0.41
RCCD1A6NED2 AL353732.1-201ENST00000569618 1459 ntBASIC17.63■□□□□ 0.41
RCCD1A6NED2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.62■□□□□ 0.41
RCCD1A6NED2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms