Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.49□□□□□ -0.09
SHISA3A0PJX4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 AC113347.1-201ENST00000413321 391 ntBASIC14.48□□□□□ -0.09
SHISA3A0PJX4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 MPDU1-223ENST00000582151 728 ntBASIC14.48□□□□□ -0.09
SHISA3A0PJX4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 AC006011.2-201ENST00000621313 1158 ntBASIC14.48□□□□□ -0.09
SHISA3A0PJX4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.48□□□□□ -0.09
SHISA3A0PJX4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 AC138035.3-201ENST00000622706 2791 ntBASIC14.48□□□□□ -0.09
SHISA3A0PJX4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 AC106881.1-201ENST00000605849 3329 ntBASIC14.48□□□□□ -0.09
SHISA3A0PJX4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHISA3A0PJX4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 AC020658.6-201ENST00000623564 1870 ntBASIC14.47□□□□□ -0.09
SHISA3A0PJX4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 AC097493.4-201ENST00000641197 219 ntBASIC14.47□□□□□ -0.09
SHISA3A0PJX4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 SIGLEC16-201ENST00000599858 1437 ntBASIC14.47□□□□□ -0.09
SHISA3A0PJX4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHISA3A0PJX4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SHISA3A0PJX4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms