Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.08■□□□□ 0.17
RNF103-CHMP3A0A140T963 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF103-CHMP3A0A140T963 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RNF103-CHMP3A0A140T963 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 ARMC10P1-201ENST00000313754 855 ntBASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 AC004817.3-201ENST00000602957 2129 ntBASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 AL591684.3-201ENST00000605187 298 ntBASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 AL445228.2-201ENST00000605589 952 ntBASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RNF103-CHMP3A0A140T963 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 AC079776.2-201ENST00000641154 1609 ntBASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 HLA-A-202ENST00000376806 1854 ntBASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF103-CHMP3A0A140T963 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 TUBB8P12-201ENST00000308911 1335 ntBASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 TUBB7P-202ENST00000428444 1305 ntBASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 TUBB8P7-204ENST00000567960 1332 ntBASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 AC073592.4-201ENST00000623827 446 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms