Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM2Q9C040 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM2Q9C040 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRIM2Q9C040 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM2Q9C040 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM2Q9C040 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM2Q9C040 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRIM2Q9C040 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 GGT3P-204ENST00000453783 1664 ntBASIC15.32■□□□□ 0.04
TRIM2Q9C040 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 AC105339.3-201ENST00000560043 636 ntBASIC15.32■□□□□ 0.04
TRIM2Q9C040 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 CYP2A7P1-201ENST00000595391 815 ntBASIC15.32■□□□□ 0.04
TRIM2Q9C040 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 FAM215A-202ENST00000632077 792 ntBASIC15.32■□□□□ 0.04
TRIM2Q9C040 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRIM2Q9C040 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM2Q9C040 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 HCG4-201ENST00000418983 998 ntBASIC15.31■□□□□ 0.04
TRIM2Q9C040 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 PMS2P1-201ENST00000431037 1228 ntBASIC15.31■□□□□ 0.04
TRIM2Q9C040 HNRNPDP1-201ENST00000439535 754 ntBASIC15.31■□□□□ 0.04
TRIM2Q9C040 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 IGHV3-65-201ENST00000523210 341 ntBASIC15.31■□□□□ 0.04
TRIM2Q9C040 AC107918.2-201ENST00000530817 355 ntBASIC15.31■□□□□ 0.04
TRIM2Q9C040 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 AC087641.1-201ENST00000557561 1021 ntBASIC15.31■□□□□ 0.04
TRIM2Q9C040 AL356488.2-201ENST00000602755 427 ntBASIC15.31■□□□□ 0.04
TRIM2Q9C040 MIR7706-201ENST00000613747 67 ntBASIC15.31■□□□□ 0.04
TRIM2Q9C040 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 AC005593.1-201ENST00000624894 515 ntBASIC15.31■□□□□ 0.04
TRIM2Q9C040 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM2Q9C040 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.31■□□□□ 0.04
TRIM2Q9C040 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms