Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 AC073621.1-201ENST00000392730 636 ntBASIC17.1■□□□□ 0.33
SCG3Q8WXD2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SCG3Q8WXD2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 AC007967.2-201ENST00000432613 625 ntBASIC17.09■□□□□ 0.33
SCG3Q8WXD2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SCG3Q8WXD2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCG3Q8WXD2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
SCG3Q8WXD2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.08■□□□□ 0.33
SCG3Q8WXD2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.08■□□□□ 0.33
SCG3Q8WXD2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SCG3Q8WXD2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCG3Q8WXD2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SCG3Q8WXD2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
SCG3Q8WXD2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.08■□□□□ 0.33
SCG3Q8WXD2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SCG3Q8WXD2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCG3Q8WXD2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.08■□□□□ 0.33
SCG3Q8WXD2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 AP002414.1-201ENST00000391405 1147 ntBASIC17.08■□□□□ 0.32
SCG3Q8WXD2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 AC002347.1-201ENST00000569543 541 ntBASIC17.08■□□□□ 0.32
SCG3Q8WXD2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
SCG3Q8WXD2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms