Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 AC011467.2-201ENST00000598425 242 ntBASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 AL009178.2-201ENST00000597278 2719 ntBASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 AC136621.1-201ENST00000624017 2304 ntBASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 MIR648-201ENST00000385046 94 ntBASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 AC011840.4-201ENST00000578471 627 ntBASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CKAP2Q8WWK9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 AC004817.3-201ENST00000602957 2129 ntBASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 KRT18P38-201ENST00000449496 1282 ntBASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.52■□□□□ 0.24
CKAP2Q8WWK9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms