Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 MIR661-201ENST00000384842 89 ntBASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 IGHV3-42-201ENST00000520410 361 ntBASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 LINC02012-201ENST00000608206 1725 ntBASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 AC008741.2-201ENST00000612792 3115 ntBASIC17.41■□□□□ 0.38
SHKBP1Q8TBC3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 AC105020.1-201ENST00000435356 2205 ntBASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 AC142381.1-201ENST00000426099 345 ntBASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 MIR4453-201ENST00000584019 89 ntBASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 AL158211.3-201ENST00000607385 239 ntBASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SHKBP1Q8TBC3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 AC236430.1-201ENST00000402231 743 ntBASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 TSPY16P-201ENST00000449843 468 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms