Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYVN1Q86TM6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.37■□□□□ 0.21
SYVN1Q86TM6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SYVN1Q86TM6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.37■□□□□ 0.21
SYVN1Q86TM6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYVN1Q86TM6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYVN1Q86TM6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SYVN1Q86TM6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SYVN1Q86TM6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SYVN1Q86TM6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYVN1Q86TM6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYVN1Q86TM6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
SYVN1Q86TM6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SYVN1Q86TM6 AC002310.6-201ENST00000624451 1377 ntBASIC16.37■□□□□ 0.21
SYVN1Q86TM6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYVN1Q86TM6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.37■□□□□ 0.21
SYVN1Q86TM6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYVN1Q86TM6 ME2P1-201ENST00000426028 1970 ntBASIC16.37■□□□□ 0.21
SYVN1Q86TM6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SYVN1Q86TM6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 PCDHA1-201ENST00000378133 2726 ntBASIC16.36■□□□□ 0.21
SYVN1Q86TM6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 MCCD1P2-201ENST00000423228 335 ntBASIC16.36■□□□□ 0.21
SYVN1Q86TM6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 PAWRP1-201ENST00000451083 565 ntBASIC16.36■□□□□ 0.21
SYVN1Q86TM6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 AC108073.2-201ENST00000464002 357 ntBASIC16.36■□□□□ 0.21
SYVN1Q86TM6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 AC134684.3-201ENST00000641758 218 ntBASIC16.36■□□□□ 0.21
SYVN1Q86TM6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 TOP3BP1-201ENST00000420768 1380 ntBASIC16.36■□□□□ 0.21
SYVN1Q86TM6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 SNX33P1-201ENST00000592116 1762 ntBASIC16.36■□□□□ 0.21
SYVN1Q86TM6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYVN1Q86TM6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.36■□□□□ 0.21
SYVN1Q86TM6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 AL513523.2-202ENST00000427283 2040 ntBASIC16.35■□□□□ 0.21
SYVN1Q86TM6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.35■□□□□ 0.21
SYVN1Q86TM6 RPS8P6-201ENST00000426177 609 ntBASIC16.35■□□□□ 0.21
SYVN1Q86TM6 VN2R19P-201ENST00000442399 1052 ntBASIC16.35■□□□□ 0.21
SYVN1Q86TM6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 AL139011.1-202ENST00000642063 584 ntBASIC16.35■□□□□ 0.21
SYVN1Q86TM6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYVN1Q86TM6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms