Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IRX4P78413 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IRX4P78413 RNF216P1-203ENST00000404404 2427 ntBASIC17.36■□□□□ 0.37
IRX4P78413 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IRX4P78413 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IRX4P78413 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
IRX4P78413 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IRX4P78413 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX4P78413 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
IRX4P78413 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX4P78413 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IRX4P78413 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.35■□□□□ 0.37
IRX4P78413 AC092171.3-201ENST00000610122 2651 ntBASIC17.35■□□□□ 0.37
IRX4P78413 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.35■□□□□ 0.37
IRX4P78413 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX4P78413 AC063926.3-201ENST00000624734 5658 ntBASIC17.35■□□□□ 0.37
IRX4P78413 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
IRX4P78413 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX4P78413 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX4P78413 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
IRX4P78413 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IRX4P78413 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX4P78413 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX4P78413 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.35■□□□□ 0.37
IRX4P78413 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
IRX4P78413 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IRX4P78413 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.35■□□□□ 0.37
IRX4P78413 COX20P2-201ENST00000452636 358 ntBASIC17.35■□□□□ 0.37
IRX4P78413 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.35■□□□□ 0.37
IRX4P78413 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.35■□□□□ 0.37
IRX4P78413 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IRX4P78413 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
IRX4P78413 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.35■□□□□ 0.37
IRX4P78413 AC239800.4-201ENST00000603712 296 ntBASIC17.35■□□□□ 0.37
IRX4P78413 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.35■□□□□ 0.37
IRX4P78413 AC004877.2-201ENST00000623941 599 ntBASIC17.35■□□□□ 0.37
IRX4P78413 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IRX4P78413 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IRX4P78413 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
IRX4P78413 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
IRX4P78413 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
IRX4P78413 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX4P78413 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
IRX4P78413 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
IRX4P78413 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IRX4P78413 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX4P78413 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX4P78413 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IRX4P78413 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IRX4P78413 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
IRX4P78413 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IRX4P78413 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IRX4P78413 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
IRX4P78413 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
IRX4P78413 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IRX4P78413 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
IRX4P78413 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IRX4P78413 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IRX4P78413 TSEN15P1-201ENST00000423257 515 ntBASIC17.34■□□□□ 0.37
IRX4P78413 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IRX4P78413 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.34■□□□□ 0.37
IRX4P78413 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.34■□□□□ 0.37
IRX4P78413 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
IRX4P78413 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IRX4P78413 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.34■□□□□ 0.37
IRX4P78413 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
IRX4P78413 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IRX4P78413 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.33■□□□□ 0.37
IRX4P78413 AL391005.1-201ENST00000623953 2435 ntBASIC17.33■□□□□ 0.37
IRX4P78413 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
IRX4P78413 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IRX4P78413 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
IRX4P78413 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IRX4P78413 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
IRX4P78413 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
IRX4P78413 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IRX4P78413 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
IRX4P78413 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
IRX4P78413 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.33■□□□□ 0.37
IRX4P78413 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.33■□□□□ 0.37
IRX4P78413 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
IRX4P78413 NCF1C-201ENST00000438382 1427 ntBASIC17.33■□□□□ 0.36
IRX4P78413 AC068587.6-202ENST00000641839 5619 ntBASIC17.33■□□□□ 0.36
IRX4P78413 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
IRX4P78413 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IRX4P78413 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IRX4P78413 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IRX4P78413 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IRX4P78413 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
IRX4P78413 AL139400.1-201ENST00000366220 510 ntBASIC17.33■□□□□ 0.36
IRX4P78413 IGLL3P-201ENST00000412472 434 ntBASIC17.33■□□□□ 0.36
IRX4P78413 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.33■□□□□ 0.36
IRX4P78413 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.33■□□□□ 0.36
IRX4P78413 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
IRX4P78413 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.33■□□□□ 0.36
IRX4P78413 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.33■□□□□ 0.36
IRX4P78413 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
IRX4P78413 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
IRX4P78413 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.33■□□□□ 0.36
IRX4P78413 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms