Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S1P61966 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S1P61966 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
AP1S1P61966 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
AP1S1P61966 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S1P61966 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S1P61966 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S1P61966 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S1P61966 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S1P61966 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
AP1S1P61966 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
AP1S1P61966 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
AP1S1P61966 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
AP1S1P61966 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.69■□□□□ 0.26
AP1S1P61966 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
AP1S1P61966 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.69■□□□□ 0.26
AP1S1P61966 SPCS2P4-201ENST00000436160 681 ntBASIC16.69■□□□□ 0.26
AP1S1P61966 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.69■□□□□ 0.26
AP1S1P61966 PRYP6-201ENST00000514804 343 ntBASIC16.69■□□□□ 0.26
AP1S1P61966 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 AC004835.2-201ENST00000603762 682 ntBASIC16.69■□□□□ 0.26
AP1S1P61966 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.69■□□□□ 0.26
AP1S1P61966 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
AP1S1P61966 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.69■□□□□ 0.26
AP1S1P61966 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
AP1S1P61966 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.69■□□□□ 0.26
AP1S1P61966 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S1P61966 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.69■□□□□ 0.26
AP1S1P61966 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S1P61966 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S1P61966 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S1P61966 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S1P61966 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.68■□□□□ 0.26
AP1S1P61966 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S1P61966 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
AP1S1P61966 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.68■□□□□ 0.26
AP1S1P61966 AC004461.1-201ENST00000412461 403 ntBASIC16.68■□□□□ 0.26
AP1S1P61966 AL592309.1-201ENST00000443127 649 ntBASIC16.68■□□□□ 0.26
AP1S1P61966 DNAJB3-202ENST00000449667 1266 ntBASIC16.68■□□□□ 0.26
AP1S1P61966 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.68■□□□□ 0.26
AP1S1P61966 IGHV3-62-201ENST00000520057 340 ntBASIC16.68■□□□□ 0.26
AP1S1P61966 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.68■□□□□ 0.26
AP1S1P61966 SNHG9-202ENST00000564014 471 ntBASIC16.68■□□□□ 0.26
AP1S1P61966 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.68■□□□□ 0.26
AP1S1P61966 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.68■□□□□ 0.26
AP1S1P61966 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
AP1S1P61966 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S1P61966 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.68■□□□□ 0.26
AP1S1P61966 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S1P61966 AC009053.2-201ENST00000563701 2365 ntBASIC16.68■□□□□ 0.26
AP1S1P61966 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.68■□□□□ 0.26
AP1S1P61966 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
AP1S1P61966 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S1P61966 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S1P61966 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S1P61966 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S1P61966 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S1P61966 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S1P61966 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S1P61966 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.68■□□□□ 0.26
AP1S1P61966 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
AP1S1P61966 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S1P61966 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.68■□□□□ 0.26
AP1S1P61966 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S1P61966 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S1P61966 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S1P61966 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S1P61966 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
AP1S1P61966 AC073439.1-201ENST00000624121 1774 ntBASIC16.67■□□□□ 0.26
AP1S1P61966 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
AP1S1P61966 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S1P61966 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
AP1S1P61966 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.67■□□□□ 0.26
AP1S1P61966 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.67■□□□□ 0.26
AP1S1P61966 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S1P61966 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S1P61966 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
AP1S1P61966 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.67■□□□□ 0.26
AP1S1P61966 CNN2P11-201ENST00000429351 262 ntBASIC16.67■□□□□ 0.26
AP1S1P61966 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.67■□□□□ 0.26
AP1S1P61966 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms