Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RAB38P57729 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
RAB38P57729 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB38P57729 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RAB38P57729 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
RAB38P57729 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RAB38P57729 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB38P57729 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB38P57729 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.59■□□□□ 0.09
RAB38P57729 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.58■□□□□ 0.09
RAB38P57729 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RAB38P57729 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB38P57729 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.58■□□□□ 0.09
RAB38P57729 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB38P57729 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB38P57729 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB38P57729 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB38P57729 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.58■□□□□ 0.08
RAB38P57729 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RAB38P57729 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB38P57729 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB38P57729 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB38P57729 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB38P57729 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB38P57729 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB38P57729 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
RAB38P57729 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB38P57729 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB38P57729 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB38P57729 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB38P57729 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.58■□□□□ 0.08
RAB38P57729 MIR1233-2-201ENST00000408138 82 ntBASIC15.58■□□□□ 0.08
RAB38P57729 MIR1233-1-201ENST00000408722 82 ntBASIC15.58■□□□□ 0.08
RAB38P57729 AC211486.1-202ENST00000416371 468 ntBASIC15.58■□□□□ 0.08
RAB38P57729 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB38P57729 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB38P57729 TIMM8BP1-201ENST00000452384 211 ntBASIC15.58■□□□□ 0.08
RAB38P57729 AC211476.1-201ENST00000503899 468 ntBASIC15.58■□□□□ 0.08
RAB38P57729 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
RAB38P57729 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB38P57729 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.58■□□□□ 0.08
RAB38P57729 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.58■□□□□ 0.08
RAB38P57729 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.58■□□□□ 0.08
RAB38P57729 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB38P57729 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RAB38P57729 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB38P57729 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB38P57729 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB38P57729 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB38P57729 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
RAB38P57729 CROCCP1-201ENST00000426910 5675 ntBASIC15.58■□□□□ 0.08
RAB38P57729 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB38P57729 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB38P57729 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB38P57729 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RAB38P57729 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB38P57729 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 PCDHA14-201ENST00000506751 2298 ntBASIC15.57■□□□□ 0.08
RAB38P57729 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB38P57729 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB38P57729 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB38P57729 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RAB38P57729 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB38P57729 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB38P57729 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB38P57729 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.57■□□□□ 0.08
RAB38P57729 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
RAB38P57729 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB38P57729 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB38P57729 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
RAB38P57729 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
RAB38P57729 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB38P57729 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB38P57729 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.57■□□□□ 0.08
RAB38P57729 KRT8P48-201ENST00000515599 1220 ntBASIC15.57■□□□□ 0.08
RAB38P57729 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB38P57729 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB38P57729 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RAB38P57729 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB38P57729 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RAB38P57729 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
RAB38P57729 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB38P57729 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms