Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
GFRA1P56159 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.84□□□□□ -0.03
GFRA1P56159 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.84□□□□□ -0.03
GFRA1P56159 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.84□□□□□ -0.03
GFRA1P56159 CYMP-203ENST00000474680 1263 ntBASIC14.84□□□□□ -0.03
GFRA1P56159 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
GFRA1P56159 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.84□□□□□ -0.03
GFRA1P56159 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
GFRA1P56159 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
GFRA1P56159 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
GFRA1P56159 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GFRA1P56159 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GFRA1P56159 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GFRA1P56159 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GFRA1P56159 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.84□□□□□ -0.03
GFRA1P56159 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GFRA1P56159 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
GFRA1P56159 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GFRA1P56159 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
GFRA1P56159 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
GFRA1P56159 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GFRA1P56159 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GFRA1P56159 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.83□□□□□ -0.03
GFRA1P56159 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GFRA1P56159 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GFRA1P56159 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.83□□□□□ -0.03
GFRA1P56159 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
GFRA1P56159 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.83□□□□□ -0.03
GFRA1P56159 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GFRA1P56159 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.83□□□□□ -0.04
GFRA1P56159 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.83□□□□□ -0.04
GFRA1P56159 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.83□□□□□ -0.04
GFRA1P56159 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
GFRA1P56159 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
GFRA1P56159 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
GFRA1P56159 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.83□□□□□ -0.04
GFRA1P56159 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.83□□□□□ -0.04
GFRA1P56159 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.83□□□□□ -0.04
GFRA1P56159 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.83□□□□□ -0.04
GFRA1P56159 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.83□□□□□ -0.04
GFRA1P56159 AC093724.1-201ENST00000448659 1027 ntBASIC14.83□□□□□ -0.04
GFRA1P56159 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
GFRA1P56159 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.83□□□□□ -0.04
GFRA1P56159 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.83□□□□□ -0.04
GFRA1P56159 AC069262.1-201ENST00000539058 672 ntBASIC14.83□□□□□ -0.04
GFRA1P56159 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.83□□□□□ -0.04
GFRA1P56159 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.83□□□□□ -0.04
GFRA1P56159 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.83□□□□□ -0.04
GFRA1P56159 Z92544.3-201ENST00000624747 417 ntBASIC14.83□□□□□ -0.04
GFRA1P56159 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.83□□□□□ -0.04
GFRA1P56159 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.83□□□□□ -0.04
GFRA1P56159 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.83□□□□□ -0.04
GFRA1P56159 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.83□□□□□ -0.04
GFRA1P56159 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.83□□□□□ -0.04
GFRA1P56159 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
GFRA1P56159 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.83□□□□□ -0.04
GFRA1P56159 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
GFRA1P56159 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.83□□□□□ -0.04
GFRA1P56159 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GFRA1P56159 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GFRA1P56159 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.82□□□□□ -0.04
GFRA1P56159 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GFRA1P56159 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 PCGF3-213ENST00000620529 1899 ntBASIC14.82□□□□□ -0.04
GFRA1P56159 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
GFRA1P56159 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GFRA1P56159 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.82□□□□□ -0.04
GFRA1P56159 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GFRA1P56159 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.82□□□□□ -0.04
GFRA1P56159 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.82□□□□□ -0.04
GFRA1P56159 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 CNN2P2-201ENST00000443536 909 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms