Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SMSP52788 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.63■□□□□ 0.09
SMSP52788 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.63■□□□□ 0.09
SMSP52788 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.63■□□□□ 0.09
SMSP52788 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMSP52788 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMSP52788 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMSP52788 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.63■□□□□ 0.09
SMSP52788 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMSP52788 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SMSP52788 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMSP52788 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
SMSP52788 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SMSP52788 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
SMSP52788 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SMSP52788 AP002490.2-201ENST00000524791 560 ntBASIC15.63■□□□□ 0.09
SMSP52788 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMSP52788 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMSP52788 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.63■□□□□ 0.09
SMSP52788 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMSP52788 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.63■□□□□ 0.09
SMSP52788 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SMSP52788 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
SMSP52788 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.63■□□□□ 0.09
SMSP52788 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SMSP52788 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMSP52788 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SMSP52788 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.63■□□□□ 0.09
SMSP52788 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.63■□□□□ 0.09
SMSP52788 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.63■□□□□ 0.09
SMSP52788 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.63■□□□□ 0.09
SMSP52788 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.63■□□□□ 0.09
SMSP52788 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMSP52788 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SMSP52788 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SMSP52788 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 HYMAI-201ENST00000635591 3347 ntBASIC15.62■□□□□ 0.09
SMSP52788 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
SMSP52788 AC079328.2-201ENST00000561241 3354 ntBASIC15.62■□□□□ 0.09
SMSP52788 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.62■□□□□ 0.09
SMSP52788 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.62■□□□□ 0.09
SMSP52788 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.62■□□□□ 0.09
SMSP52788 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.62■□□□□ 0.09
SMSP52788 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SMSP52788 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.62■□□□□ 0.09
SMSP52788 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.62■□□□□ 0.09
SMSP52788 C20orf181-201ENST00000623918 480 ntBASIC15.62■□□□□ 0.09
SMSP52788 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.62■□□□□ 0.09
SMSP52788 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.62■□□□□ 0.09
SMSP52788 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.62■□□□□ 0.09
SMSP52788 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 AL049757.1-201ENST00000616842 1596 ntBASIC15.62■□□□□ 0.09
SMSP52788 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMSP52788 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.62■□□□□ 0.09
SMSP52788 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.62■□□□□ 0.09
SMSP52788 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMSP52788 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMSP52788 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SMSP52788 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.61■□□□□ 0.09
SMSP52788 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SMSP52788 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMSP52788 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMSP52788 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMSP52788 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.61■□□□□ 0.09
SMSP52788 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMSP52788 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SMSP52788 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SMSP52788 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
SMSP52788 AL513477.1-201ENST00000602865 2407 ntBASIC15.61■□□□□ 0.09
SMSP52788 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SMSP52788 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.61■□□□□ 0.09
SMSP52788 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SMSP52788 YBX1P5-201ENST00000509441 847 ntBASIC15.61■□□□□ 0.09
SMSP52788 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SMSP52788 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SMSP52788 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.61■□□□□ 0.09
SMSP52788 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.61■□□□□ 0.09
SMSP52788 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SMSP52788 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMSP52788 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.61■□□□□ 0.09
SMSP52788 MIR4469-201ENST00000583919 79 ntBASIC15.61■□□□□ 0.09
SMSP52788 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SMSP52788 AC004706.3-202ENST00000621574 984 ntBASIC15.61■□□□□ 0.09
SMSP52788 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms