Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CSNK1DP48730 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1DP48730 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1DP48730 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.59■□□□□ 0.25
CSNK1DP48730 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1DP48730 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CSNK1DP48730 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1DP48730 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1DP48730 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1DP48730 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1DP48730 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1DP48730 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1DP48730 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1DP48730 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1DP48730 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
CSNK1DP48730 FAM220BP-201ENST00000377689 816 ntBASIC16.59■□□□□ 0.25
CSNK1DP48730 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1DP48730 AC092183.1-201ENST00000469884 875 ntBASIC16.59■□□□□ 0.25
CSNK1DP48730 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1DP48730 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1DP48730 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.59■□□□□ 0.25
CSNK1DP48730 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.59■□□□□ 0.25
CSNK1DP48730 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1DP48730 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.59■□□□□ 0.25
CSNK1DP48730 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1DP48730 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1DP48730 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1DP48730 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
CSNK1DP48730 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1DP48730 AL589702.1-201ENST00000641229 1509 ntBASIC16.59■□□□□ 0.25
CSNK1DP48730 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.59■□□□□ 0.25
CSNK1DP48730 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CSNK1DP48730 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1DP48730 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1DP48730 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1DP48730 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1DP48730 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CSNK1DP48730 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1DP48730 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1DP48730 U82695.1-201ENST00000635752 1889 ntBASIC16.59■□□□□ 0.25
CSNK1DP48730 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSNK1DP48730 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.58■□□□□ 0.25
CSNK1DP48730 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.58■□□□□ 0.25
CSNK1DP48730 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSNK1DP48730 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CSNK1DP48730 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CSNK1DP48730 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSNK1DP48730 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.58■□□□□ 0.25
CSNK1DP48730 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSNK1DP48730 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CSNK1DP48730 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
CSNK1DP48730 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1DP48730 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1DP48730 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1DP48730 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1DP48730 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1DP48730 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1DP48730 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.58■□□□□ 0.24
CSNK1DP48730 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.58■□□□□ 0.24
CSNK1DP48730 TSEN15P1-201ENST00000423257 515 ntBASIC16.58■□□□□ 0.24
CSNK1DP48730 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.58■□□□□ 0.24
CSNK1DP48730 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.58■□□□□ 0.24
CSNK1DP48730 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.58■□□□□ 0.24
CSNK1DP48730 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1DP48730 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.58■□□□□ 0.24
CSNK1DP48730 AP001059.3-201ENST00000619053 235 ntBASIC16.58■□□□□ 0.24
CSNK1DP48730 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.58■□□□□ 0.24
CSNK1DP48730 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CSNK1DP48730 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CSNK1DP48730 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1DP48730 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1DP48730 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CSNK1DP48730 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1DP48730 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1DP48730 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1DP48730 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CSNK1DP48730 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1DP48730 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.57■□□□□ 0.24
CSNK1DP48730 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1DP48730 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.57■□□□□ 0.24
CSNK1DP48730 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1DP48730 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1DP48730 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.57■□□□□ 0.24
CSNK1DP48730 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1DP48730 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1DP48730 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1DP48730 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.57■□□□□ 0.24
CSNK1DP48730 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.57■□□□□ 0.24
CSNK1DP48730 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.57■□□□□ 0.24
CSNK1DP48730 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1DP48730 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1DP48730 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1DP48730 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1DP48730 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1DP48730 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1DP48730 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CSNK1DP48730 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1DP48730 KRT18P28-201ENST00000453838 1332 ntBASIC16.57■□□□□ 0.24
CSNK1DP48730 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1DP48730 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 420.1 ms