Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL15A1P39059 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
COL15A1P39059 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL15A1P39059 AC087499.6-201ENST00000411576 835 ntBASIC20.84■□□□□ 0.93
COL15A1P39059 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.84■□□□□ 0.93
COL15A1P39059 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL15A1P39059 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.84■□□□□ 0.93
COL15A1P39059 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.84■□□□□ 0.93
COL15A1P39059 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.84■□□□□ 0.93
COL15A1P39059 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL15A1P39059 SLC7A15P-201ENST00000424028 1363 ntBASIC20.83■□□□□ 0.93
COL15A1P39059 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL15A1P39059 AL391256.1-201ENST00000443260 1855 ntBASIC20.83■□□□□ 0.93
COL15A1P39059 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL15A1P39059 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
COL15A1P39059 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.83■□□□□ 0.93
COL15A1P39059 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL15A1P39059 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL15A1P39059 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL15A1P39059 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL15A1P39059 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL15A1P39059 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL15A1P39059 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL15A1P39059 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL15A1P39059 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL15A1P39059 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
COL15A1P39059 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
COL15A1P39059 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.83■□□□□ 0.92
COL15A1P39059 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.83■□□□□ 0.92
COL15A1P39059 SERBP1P3-201ENST00000459980 809 ntBASIC20.83■□□□□ 0.92
COL15A1P39059 RN7SL752P-201ENST00000463779 287 ntBASIC20.83■□□□□ 0.92
COL15A1P39059 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.83■□□□□ 0.92
COL15A1P39059 AC061975.2-201ENST00000581722 295 ntBASIC20.83■□□□□ 0.92
COL15A1P39059 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL15A1P39059 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL15A1P39059 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.82■□□□□ 0.92
COL15A1P39059 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL15A1P39059 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
COL15A1P39059 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL15A1P39059 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL15A1P39059 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL15A1P39059 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL15A1P39059 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL15A1P39059 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL15A1P39059 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
COL15A1P39059 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL15A1P39059 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
COL15A1P39059 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL15A1P39059 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL15A1P39059 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL15A1P39059 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL15A1P39059 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
COL15A1P39059 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL15A1P39059 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.82■□□□□ 0.92
COL15A1P39059 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.82■□□□□ 0.92
COL15A1P39059 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.82■□□□□ 0.92
COL15A1P39059 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
COL15A1P39059 ACA64.2-201ENST00000459014 129 ntBASIC20.82■□□□□ 0.92
COL15A1P39059 AC055876.2-201ENST00000531834 546 ntBASIC20.82■□□□□ 0.92
COL15A1P39059 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL15A1P39059 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.82■□□□□ 0.92
COL15A1P39059 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.82■□□□□ 0.92
COL15A1P39059 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL15A1P39059 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
COL15A1P39059 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COL15A1P39059 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL15A1P39059 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL15A1P39059 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL15A1P39059 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL15A1P39059 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.81■□□□□ 0.92
COL15A1P39059 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL15A1P39059 AC012313.1-201ENST00000593393 3059 ntBASIC20.81■□□□□ 0.92
COL15A1P39059 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL15A1P39059 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COL15A1P39059 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.81■□□□□ 0.92
COL15A1P39059 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL15A1P39059 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.81■□□□□ 0.92
COL15A1P39059 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL15A1P39059 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.81■□□□□ 0.92
COL15A1P39059 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
COL15A1P39059 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL15A1P39059 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL15A1P39059 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL15A1P39059 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL15A1P39059 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COL15A1P39059 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.81■□□□□ 0.92
COL15A1P39059 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.81■□□□□ 0.92
COL15A1P39059 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.81■□□□□ 0.92
COL15A1P39059 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.81■□□□□ 0.92
COL15A1P39059 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
COL15A1P39059 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.8■□□□□ 0.92
COL15A1P39059 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL15A1P39059 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL15A1P39059 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL15A1P39059 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
COL15A1P39059 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.8■□□□□ 0.92
COL15A1P39059 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL15A1P39059 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.8■□□□□ 0.92
COL15A1P39059 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL15A1P39059 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms