Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA3P32297 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.56■□□□□ 0.4
CHRNA3P32297 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA3P32297 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA3P32297 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA3P32297 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA3P32297 ELK2BP-201ENST00000415014 1224 ntBASIC17.56■□□□□ 0.4
CHRNA3P32297 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CHRNA3P32297 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.56■□□□□ 0.4
CHRNA3P32297 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA3P32297 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.56■□□□□ 0.4
CHRNA3P32297 AC034105.1-201ENST00000563488 319 ntBASIC17.56■□□□□ 0.4
CHRNA3P32297 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CHRNA3P32297 AC013467.2-201ENST00000605472 835 ntBASIC17.56■□□□□ 0.4
CHRNA3P32297 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.56■□□□□ 0.4
CHRNA3P32297 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.56■□□□□ 0.4
CHRNA3P32297 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA3P32297 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.56■□□□□ 0.4
CHRNA3P32297 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA3P32297 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CHRNA3P32297 AC006504.4-201ENST00000592118 1568 ntBASIC17.56■□□□□ 0.4
CHRNA3P32297 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CHRNA3P32297 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA3P32297 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA3P32297 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CHRNA3P32297 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.56■□□□□ 0.4
CHRNA3P32297 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.56■□□□□ 0.4
CHRNA3P32297 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CHRNA3P32297 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA3P32297 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CHRNA3P32297 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.55■□□□□ 0.4
CHRNA3P32297 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA3P32297 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.55■□□□□ 0.4
CHRNA3P32297 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA3P32297 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA3P32297 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.55■□□□□ 0.4
CHRNA3P32297 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.55■□□□□ 0.4
CHRNA3P32297 LINC00982-205ENST00000420957 435 ntBASIC17.55■□□□□ 0.4
CHRNA3P32297 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA3P32297 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA3P32297 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.55■□□□□ 0.4
CHRNA3P32297 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CHRNA3P32297 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHRNA3P32297 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHRNA3P32297 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHRNA3P32297 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CHRNA3P32297 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 AC105917.1-201ENST00000506637 2539 ntBASIC17.55■□□□□ 0.4
CHRNA3P32297 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA3P32297 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CHRNA3P32297 AC006277.1-201ENST00000624348 1610 ntBASIC17.54■□□□□ 0.4
CHRNA3P32297 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.54■□□□□ 0.4
CHRNA3P32297 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CHRNA3P32297 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.54■□□□□ 0.4
CHRNA3P32297 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CHRNA3P32297 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.54■□□□□ 0.4
CHRNA3P32297 MIR940-201ENST00000401276 94 ntBASIC17.54■□□□□ 0.4
CHRNA3P32297 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.54■□□□□ 0.4
CHRNA3P32297 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CHRNA3P32297 POLD2P1-201ENST00000511220 997 ntBASIC17.54■□□□□ 0.4
CHRNA3P32297 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CHRNA3P32297 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CHRNA3P32297 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CHRNA3P32297 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.54■□□□□ 0.4
CHRNA3P32297 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA3P32297 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.54■□□□□ 0.4
CHRNA3P32297 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms