Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RARBP10826 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.52■□□□□ 0.55
RARBP10826 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
RARBP10826 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RARBP10826 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RARBP10826 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RARBP10826 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
RARBP10826 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.51■□□□□ 0.55
RARBP10826 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RARBP10826 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RARBP10826 AC012313.1-201ENST00000593393 3059 ntBASIC18.51■□□□□ 0.55
RARBP10826 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RARBP10826 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.51■□□□□ 0.55
RARBP10826 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RARBP10826 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.51■□□□□ 0.55
RARBP10826 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RARBP10826 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.51■□□□□ 0.55
RARBP10826 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.51■□□□□ 0.55
RARBP10826 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RARBP10826 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
RARBP10826 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.51■□□□□ 0.55
RARBP10826 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.51■□□□□ 0.55
RARBP10826 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.51■□□□□ 0.55
RARBP10826 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RARBP10826 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RARBP10826 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.51■□□□□ 0.55
RARBP10826 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RARBP10826 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.51■□□□□ 0.55
RARBP10826 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
RARBP10826 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RARBP10826 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARBP10826 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARBP10826 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.5■□□□□ 0.55
RARBP10826 TUBB8P12-201ENST00000308911 1335 ntBASIC18.5■□□□□ 0.55
RARBP10826 TUBB7P-202ENST00000428444 1305 ntBASIC18.5■□□□□ 0.55
RARBP10826 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARBP10826 TUBB8P7-204ENST00000567960 1332 ntBASIC18.5■□□□□ 0.55
RARBP10826 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RARBP10826 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARBP10826 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RARBP10826 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARBP10826 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARBP10826 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARBP10826 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.5■□□□□ 0.55
RARBP10826 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.5■□□□□ 0.55
RARBP10826 AC011495.1-201ENST00000498085 584 ntBASIC18.5■□□□□ 0.55
RARBP10826 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RARBP10826 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.5■□□□□ 0.55
RARBP10826 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.5■□□□□ 0.55
RARBP10826 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.5■□□□□ 0.55
RARBP10826 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.5■□□□□ 0.55
RARBP10826 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.5■□□□□ 0.55
RARBP10826 IGHV3-72-202ENST00000621503 303 ntBASIC18.5■□□□□ 0.55
RARBP10826 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARBP10826 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARBP10826 AL138688.1-201ENST00000624851 1594 ntBASIC18.5■□□□□ 0.55
RARBP10826 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARBP10826 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RARBP10826 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RARBP10826 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.5■□□□□ 0.55
RARBP10826 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARBP10826 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.49■□□□□ 0.55
RARBP10826 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RARBP10826 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RARBP10826 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARBP10826 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RARBP10826 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARBP10826 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.49■□□□□ 0.55
RARBP10826 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARBP10826 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARBP10826 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RARBP10826 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
RARBP10826 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.49■□□□□ 0.55
RARBP10826 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARBP10826 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RARBP10826 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.49■□□□□ 0.55
RARBP10826 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.49■□□□□ 0.55
RARBP10826 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARBP10826 AL512384.1-201ENST00000406683 331 ntBASIC18.49■□□□□ 0.55
RARBP10826 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
RARBP10826 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARBP10826 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.49■□□□□ 0.55
RARBP10826 AC093004.1-201ENST00000508850 424 ntBASIC18.49■□□□□ 0.55
RARBP10826 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.49■□□□□ 0.55
RARBP10826 DOC2GP-202ENST00000514950 1163 ntBASIC18.49■□□□□ 0.55
RARBP10826 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
RARBP10826 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RARBP10826 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RARBP10826 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
RARBP10826 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.49■□□□□ 0.55
RARBP10826 AC010336.2-201ENST00000564226 506 ntBASIC18.49■□□□□ 0.55
RARBP10826 AC017083.2-201ENST00000608069 979 ntBASIC18.49■□□□□ 0.55
RARBP10826 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.49■□□□□ 0.55
RARBP10826 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARBP10826 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARBP10826 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARBP10826 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.49■□□□□ 0.55
RARBP10826 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RARBP10826 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RARBP10826 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms