Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
IGHV4-38-2P0DP08 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.37□□□□□ -0.27
IGHV4-38-2P0DP08 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-38-2P0DP08 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-38-2P0DP08 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-38-2P0DP08 AC100757.3-201ENST00000622361 1406 ntBASIC13.37□□□□□ -0.27
IGHV4-38-2P0DP08 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-38-2P0DP08 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.37□□□□□ -0.27
IGHV4-38-2P0DP08 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-38-2P0DP08 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-38-2P0DP08 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
IGHV4-38-2P0DP08 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-38-2P0DP08 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-38-2P0DP08 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 FAM220BP-201ENST00000377689 816 ntBASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 AL353705.2-201ENST00000428243 662 ntBASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 AC098859.1-201ENST00000502915 1238 ntBASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 TERF1P3-201ENST00000505638 1227 ntBASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 AL138828.2-201ENST00000615812 383 ntBASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 AL139011.1-202ENST00000642063 584 ntBASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
IGHV4-38-2P0DP08 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 AL603756.1-201ENST00000606511 2163 ntBASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 MTND6P24-201ENST00000440466 518 ntBASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 AC004890.2-204ENST00000481968 304 ntBASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 LINC02560-201ENST00000596379 459 ntBASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 AL590560.3-201ENST00000623350 461 ntBASIC13.35□□□□□ -0.27
IGHV4-38-2P0DP08 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms