Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.81■□□□□ 0.28
KDELR3O43731 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.81■□□□□ 0.28
KDELR3O43731 AC105233.2-201ENST00000523697 349 ntBASIC16.81■□□□□ 0.28
KDELR3O43731 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.81■□□□□ 0.28
KDELR3O43731 AF228730.5-201ENST00000530288 346 ntBASIC16.81■□□□□ 0.28
KDELR3O43731 AC093520.2-201ENST00000561830 333 ntBASIC16.81■□□□□ 0.28
KDELR3O43731 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
KDELR3O43731 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.81■□□□□ 0.28
KDELR3O43731 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.81■□□□□ 0.28
KDELR3O43731 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.81■□□□□ 0.28
KDELR3O43731 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.81■□□□□ 0.28
KDELR3O43731 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.81■□□□□ 0.28
KDELR3O43731 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.81■□□□□ 0.28
KDELR3O43731 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
KDELR3O43731 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
KDELR3O43731 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KDELR3O43731 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDELR3O43731 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.8■□□□□ 0.28
KDELR3O43731 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.8■□□□□ 0.28
KDELR3O43731 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDELR3O43731 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDELR3O43731 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KDELR3O43731 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
KDELR3O43731 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.8■□□□□ 0.28
KDELR3O43731 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.8■□□□□ 0.28
KDELR3O43731 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.8■□□□□ 0.28
KDELR3O43731 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KDELR3O43731 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KDELR3O43731 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDELR3O43731 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KDELR3O43731 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDELR3O43731 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.8■□□□□ 0.28
KDELR3O43731 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KDELR3O43731 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.8■□□□□ 0.28
KDELR3O43731 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.8■□□□□ 0.28
KDELR3O43731 AL627223.1-201ENST00000416693 442 ntBASIC16.8■□□□□ 0.28
KDELR3O43731 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.8■□□□□ 0.28
KDELR3O43731 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.8■□□□□ 0.28
KDELR3O43731 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KDELR3O43731 AC093724.1-201ENST00000448659 1027 ntBASIC16.8■□□□□ 0.28
KDELR3O43731 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.8■□□□□ 0.28
KDELR3O43731 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
KDELR3O43731 AP000842.3-202ENST00000569238 1080 ntBASIC16.8■□□□□ 0.28
KDELR3O43731 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
KDELR3O43731 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDELR3O43731 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KDELR3O43731 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDELR3O43731 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDELR3O43731 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDELR3O43731 ALOX12P2-203ENST00000570921 1945 ntBASIC16.8■□□□□ 0.28
KDELR3O43731 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.8■□□□□ 0.28
KDELR3O43731 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.8■□□□□ 0.28
KDELR3O43731 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDELR3O43731 UXT-AS1-201ENST00000590504 1525 ntBASIC16.8■□□□□ 0.28
KDELR3O43731 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.8■□□□□ 0.28
KDELR3O43731 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.8■□□□□ 0.28
KDELR3O43731 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDELR3O43731 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDELR3O43731 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.8■□□□□ 0.28
KDELR3O43731 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDELR3O43731 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDELR3O43731 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.79■□□□□ 0.28
KDELR3O43731 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
KDELR3O43731 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDELR3O43731 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KDELR3O43731 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.79■□□□□ 0.28
KDELR3O43731 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDELR3O43731 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.79■□□□□ 0.28
KDELR3O43731 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.79■□□□□ 0.28
KDELR3O43731 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.79■□□□□ 0.28
KDELR3O43731 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
KDELR3O43731 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDELR3O43731 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KDELR3O43731 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KDELR3O43731 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.79■□□□□ 0.28
KDELR3O43731 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.79■□□□□ 0.28
KDELR3O43731 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.79■□□□□ 0.28
KDELR3O43731 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.79■□□□□ 0.28
KDELR3O43731 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.79■□□□□ 0.28
KDELR3O43731 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.79■□□□□ 0.28
KDELR3O43731 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.79■□□□□ 0.28
KDELR3O43731 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.79■□□□□ 0.28
KDELR3O43731 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.79■□□□□ 0.28
KDELR3O43731 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.79■□□□□ 0.28
KDELR3O43731 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDELR3O43731 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDELR3O43731 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms