Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC11.43□□□□□ -0.58
NDUFA1O15239 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
NDUFA1O15239 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC11.43□□□□□ -0.58
NDUFA1O15239 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC11.43□□□□□ -0.58
NDUFA1O15239 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC11.43□□□□□ -0.58
NDUFA1O15239 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC11.43□□□□□ -0.58
NDUFA1O15239 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
NDUFA1O15239 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
NDUFA1O15239 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
NDUFA1O15239 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
NDUFA1O15239 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
NDUFA1O15239 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC11.43□□□□□ -0.58
NDUFA1O15239 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
NDUFA1O15239 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC11.43□□□□□ -0.58
NDUFA1O15239 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
NDUFA1O15239 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC11.43□□□□□ -0.58
NDUFA1O15239 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
NDUFA1O15239 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC11.43□□□□□ -0.58
NDUFA1O15239 STK19B-204ENST00000512515 211 ntBASIC11.43□□□□□ -0.58
NDUFA1O15239 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC11.43□□□□□ -0.58
NDUFA1O15239 AC009533.2-201ENST00000543664 586 ntBASIC11.43□□□□□ -0.58
NDUFA1O15239 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC11.43□□□□□ -0.58
NDUFA1O15239 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.43□□□□□ -0.58
NDUFA1O15239 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC11.43□□□□□ -0.58
NDUFA1O15239 VPS72-207ENST00000640458 689 ntTSL 5 BASIC11.43□□□□□ -0.58
NDUFA1O15239 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC11.43□□□□□ -0.58
NDUFA1O15239 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC11.43□□□□□ -0.58
NDUFA1O15239 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
NDUFA1O15239 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC11.43□□□□□ -0.58
NDUFA1O15239 FUT8-AS1-201ENST00000621019 1521 ntBASIC11.43□□□□□ -0.58
NDUFA1O15239 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.43□□□□□ -0.58
NDUFA1O15239 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.43□□□□□ -0.58
NDUFA1O15239 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
NDUFA1O15239 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.43□□□□□ -0.58
NDUFA1O15239 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC11.43□□□□□ -0.58
NDUFA1O15239 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC11.43□□□□□ -0.58
NDUFA1O15239 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.43□□□□□ -0.58
NDUFA1O15239 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
NDUFA1O15239 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.43□□□□□ -0.58
NDUFA1O15239 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
NDUFA1O15239 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
NDUFA1O15239 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC11.42□□□□□ -0.58
NDUFA1O15239 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC11.42□□□□□ -0.58
NDUFA1O15239 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 AC002310.6-201ENST00000624451 1377 ntBASIC11.42□□□□□ -0.58
NDUFA1O15239 LINC00895-201ENST00000629028 1637 ntBASIC11.42□□□□□ -0.58
NDUFA1O15239 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC11.42□□□□□ -0.58
NDUFA1O15239 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC11.42□□□□□ -0.58
NDUFA1O15239 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC11.42□□□□□ -0.58
NDUFA1O15239 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC11.42□□□□□ -0.58
NDUFA1O15239 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
NDUFA1O15239 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.42□□□□□ -0.58
NDUFA1O15239 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.42□□□□□ -0.58
NDUFA1O15239 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC11.42□□□□□ -0.58
NDUFA1O15239 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
NDUFA1O15239 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFA1O15239 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC11.42□□□□□ -0.58
NDUFA1O15239 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC11.42□□□□□ -0.58
NDUFA1O15239 AC211429.1-201ENST00000415277 523 ntBASIC11.42□□□□□ -0.58
NDUFA1O15239 AC246785.2-201ENST00000432512 513 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms