Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 HNRNPDP1-201ENST00000439535 754 ntBASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 AC025062.2-201ENST00000605477 670 ntBASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 AL645728.1-201ENST00000366221 2101 ntBASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.04■□□□□ 0.16
CNOT11Q9UKZ1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 AL603832.2-201ENST00000566195 2125 ntBASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 MYCLP1-201ENST00000372451 1075 ntBASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 AL031284.1-201ENST00000419297 478 ntBASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 AL020989.1-201ENST00000422979 469 ntBASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 PRYP5-201ENST00000451909 266 ntBASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 AP001005.1-201ENST00000571755 1248 ntBASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 MTDHP4-201ENST00000600287 670 ntBASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 AL022326.1-202ENST00000641533 845 ntBASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNOT11Q9UKZ1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 LINC02228-204ENST00000642115 2962 ntBASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
CNOT11Q9UKZ1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms